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BIOMARKER:

CDKN2A expression

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Other names: CDKN2A, ARF, CDK4I, CDKN2, CMM2, INK4, INK4a, MLM, MTS1, p14, p14ARF, p16, p16INK4a, p19, p19Arf, Cyclin-dependent kinase inhibitor 2A
Entrez ID:
Related biomarkers:
Associations
14d
Metallophosphoesterase-Domain-Containing Protein 2 (MPPED2) Expression in High-Risk Human Papilloma Virus-Induced Cervical Carcinoma and Its Correlation With p16INK4A Protein. (PubMed, Cureus)
A significant linear correlation (p=0.000) is found between the p16INK4A and MPPED2 proteins. Conclusion It may support the therapeutic application of MPPED2 protein to prevent cervical carcinoma progression in the near future.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
23d
Aging and senescent fates of oligodendrocyte precursor cells in the mouse brain. (PubMed, NPJ Aging)
We identified age-increased p16/Cdkn2a-expressing OPCs enriched for senescence-related pathways and distinct senescence signatures between hippocampus and fimbria. Aged brain OPC populations differ in microenvironment properties and responses to senescence-directed intervention.
Preclinical • Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
30d
Potential Prognostic Role of Protein Kinase D Isoforms in Head and Neck Cancers. (PubMed, Int J Mol Sci)
However, the role of PKD3 was elusive in some cancers. Our findings suggest that testing for PKD isotypes with immunohistochemistry may support the diagnostic estimation of tumor progression and prognosis in HNSCC with a potential therapeutic relevance.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • PKD1 (Polycystin 1) • PKD2 (Polycystin 2) • PKD3 (Polycystic Kidney Disease 3) • PRKD1 (Protein Kinase D1)
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CDKN2A expression
1m
P16INK4A drives RB1 degradation by UTP14A-catalyzed K810 ubiquitination. (PubMed, iScience)
Our findings indicate that there is a negative feedback loop between P16INK4A and RB1 expression and that disruption of this loop may partially rescue the biological outcomes of P16INK4A loss. We also revealed a hitherto unknown function for P16 INK4A in regulating proteome-scale ubiquitination by inhibiting cell proliferation, which may be useful for the development of anticancer drugs.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • RB1 (RB Transcriptional Corepressor 1) • CDK4 (Cyclin-dependent kinase 4)
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RB1 expression • CDKN2A expression
2ms
Frailty and pre-frailty associated with long-term diminished physical performance and quality of life in breast cancer and hematopoietic cell transplant survivors. (PubMed, Aging (Albany NY))
p16INK4a expression was higher in those who were frail, older than 60, and with higher expression in frail vs. fit patients who are 18-59 years. Our study highlights the high prevalence of frailty in survivors with detrimental effects on physical and overall wellbeing, and supports an association between frailty and the senescence marker p16INK4a.
Journal • HEOR
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
2ms
Comparative analysis of PD-L1 expression and molecular alterations in primary versus metastatic lung adenocarcinoma: a real-world study in China. (PubMed, Front Oncol)
Samples of metastatic tumors exhibited a higher proportion of elevated PD-L1 expression, a greater number of pathway alterations, and a higher occurrence of CDKN2A copy number deletions than primary samples. This highlights the importance of reinforcing the clinical management and follow-up of patients with CDKN2A deficiency, particularly within the subset of stage I lung adenocarcinoma.
Real-world evidence • Journal • PD(L)-1 Biomarker • IO biomarker • Real-world • Metastases
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PD-L1 (Programmed death ligand 1) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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PD-L1 expression • CDKN2A deletion • CDKN2A expression
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PD-L1 IHC 22C3 pharmDx
2ms
A Study of ABI-2280 Vaginal Insert (Previously Referred to as ABI-2280 Vaginal Tablet) in Participants With Cervical Intraepithelial Neoplasia (clinicaltrials.gov)
P1/2, N=110, Recruiting, Antiva Biosciences | N=29 --> 110 | Trial completion date: May 2024 --> Jun 2025 | Trial primary completion date: Apr 2024 --> Jun 2025
Enrollment change • Trial completion date • Trial primary completion date
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
2ms
Single-cell Transcriptomic Analysis Identifies Senescent Osteocytes that Trigger Bone Destruction in Breast Cancer Metastasis. (PubMed, Cancer Res)
Clearance of senescent cells with senolytics suppressed bone resorption and preserved bone mass in mice with breast cancer bone metastasis. These results demonstrate that osteocytes undergo pathological reprogramming by breast cancer cells and identify osteocyte senescence as an initiating event triggering lytic bone disease in breast cancer metastases.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
2ms
Study of the P16 Gene as a Predictor of Myelosuppression in Breast Cancer Patients (clinicaltrials.gov)
P=N/A, N=100, Completed, UNC Lineberger Comprehensive Cancer Center | Active, not recruiting --> Completed | Trial completion date: Dec 2025 --> Sep 2023
Trial completion • Trial completion date
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
2ms
Impact of CDKN2A gene expression on colon adenocarcinoma via biosignature analysis. (PubMed, Medicine (Baltimore))
Our results indicate that CDKN2A can be used as a marker of poor prognosis in patients with colon adenocarcinoma. CDKN2A may regulate the occurrence and development of colon adenocarcinomas by influencing immune cell infiltration and metabolic pathways.
Journal
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BRAF (B-raf proto-oncogene) • MYC (V-myc avian myelocytomatosis viral oncogene homolog) • PTEN (Phosphatase and tensin homolog) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CCND1 (Cyclin D1) • CDK4 (Cyclin-dependent kinase 4) • CTNNB1 (Catenin (cadherin-associated protein), beta 1) • CD4 (CD4 Molecule) • CDKN1A (Cyclin-dependent kinase inhibitor 1A)
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BRAF mutation • CDKN2A mutation • CDKN2A expression
2ms
Derivation of human primary prostate epithelial cell lines by differentially targeting the CDKN2A locus along with expression of hTERT. (PubMed, Sci Rep)
Based on the analyses of protein markers and RNA expression signatures, these cell lines are most closely related to a subpopulation of basal prostatic cells. Given the simplicity of this one-step methodology and the fact that it uses only the minimal genetic alterations necessary for immortalization, it should also be suitable for the establishment of cell lines from primary prostate tumor samples, an urgent need given the limited number of available prostate cancer cell lines.
Preclinical • Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • TERT (Telomerase Reverse Transcriptase)
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CDKN2A expression
6ms
Prognostic value of CDKN2A in head and neck squamous cell carcinoma via pathomics and machine learning. (PubMed, J Cell Mol Med)
Confirming CDKN2A as a crucial prognostic marker in HNSCC, this study advances the existing literature by implementing an AI-driven pathomics analysis for gene expression evaluation. This innovative methodology offers a cost-efficient and non-invasive alternative to traditional diagnostic procedures, potentially revolutionizing personalized medicine in oncology.
Journal • Machine learning
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
6ms
CDKN2A inhibited ferroptosis through activating JAK2/STAT3 pathway to modulate cisplatin resistance in cervical squamous cell carcinoma. (PubMed, Anticancer Drugs)
Moreover, CDKN2A was identified as an inhibitor of erastin-induced ferroptosis. Additionally, targeting the JAK2/STAT3 pathway enhanced ferroptosis in cisplatin-resistant cells. CDKN2A could inhibit ferroptosis in CESC through activating JAK2/STAT3 pathway to modulate cisplatin resistance.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • GPX4 (Glutathione Peroxidase 4) • ACSL4 (Acyl-CoA Synthetase Long Chain Family Member 4) • SLC7A11 (Solute Carrier Family 7 Member 11)
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CDKN2A expression
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cisplatin • erastin
7ms
A Phase 1 Study in Patients With HPV16+ Recurrent/ Metastatic Head and Neck Squamous Cell Carcinoma (clinicaltrials.gov)
P1, N=85, Active, not recruiting, Cue Biopharma | Trial completion date: Dec 2023 --> May 2025 | Trial primary completion date: Sep 2023 --> Nov 2024
Trial completion date • Trial primary completion date • Combination therapy • Metastases
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CTLA4 (Cytotoxic T-Lymphocyte Associated Protein 4)
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PD-L1 expression • CDKN2A expression
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Keytruda (pembrolizumab) • CUE-101
7ms
Determining the relationship of p16INK4a and additional molecular markers of aging with clinical frailty in hematologic malignancy. (PubMed, J Cancer Surviv)
We developed the I2 index to quantify impairments across geriatric domains and discovered that PBTL p16, Hannum, PhenoAge, and DunedinPACE are promising indicators of frailty in HM.
Journal • IO biomarker
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
7ms
Human Papillomavirus Is Rare and Does Not Correlate with p16INK4A Expression in Non-Small-Cell Lung Cancer in a Jordanian Subpopulation. (PubMed, Medicina (Kaunas))
HPV positivity is rare in NSCLC among a Jordanian subpopulation. P16 INK4a reliability as a surrogate marker for HPV infection in lung cancer must be revisited.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
7ms
De novo purine metabolism is a metabolic vulnerability of cancers with low p16 expression. (PubMed, Cancer Res Commun)
Finally, tumors with p16 knockdown were more sensitive to the anti-folate methotrexate in vivo than control tumors. Together, our data provide evidence to reevaluate the utility of these drugs in patients with p16/CDKN2Alow tumors as loss of p16/CDKN2A may provide a therapeutic window for these agents.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
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methotrexate
7ms
Three Schedules of CUE-101 Administered Before Surgery or Definitive Chemoradiation Therapy in HLA-A*0201 Positive Patients With Locally Advanced, HPV16-Positive Oropharyngeal Squamous-Cell Carcinoma (clinicaltrials.gov)
P2, N=30, Recruiting, Washington University School of Medicine | Trial completion date: Oct 2025 --> Oct 2027 | Trial primary completion date: Oct 2025 --> Oct 2027
Trial completion date • Trial primary completion date • Surgery • Metastases
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CD8 (cluster of differentiation 8) • IFNG (Interferon, gamma)
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CDKN2A expression
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CUE-101
7ms
A Cuproptosis-Related gene Signature as a Prognostic Biomarker in Thyroid Cancer Based on Transcriptomics. (PubMed, Biochem Genet)
Moreover, we discovered that CDKN2A expression was linked to a dysfunctional tumor immune microenvironment. The study shows that CDKN2A, a cuproptosis-related gene, can be used as a prognostic marker for thyroid cancer.
Journal • Gene Signature
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
7ms
Association between serum P16ink4A concentration and CIN and cervical cancer among women attending a cervical cancer clinic in western Uganda: A case control study. (PubMed, Gynecol Oncol Rep)
Serum P16ink4A may likely be associated with cervical lesions especially CC in our study population and this may aid detection of such lesions. Diagnostic utility studies for circulating P16ink4A in detection of cervical cancer are recommended.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
8ms
High P16INK4A Expression, Keratinizing Features, and Surgical Margin-Free Status are Associated with Improved Survival in Patients with Oral Squamous Cell Carcinomas. (PubMed, Asian Pac J Cancer Prev)
P16INK4A positive staining, early stages, negative cervical lymph node infiltration, and free-surgical margins are associated with better prognosis in OSCC patients. The study emphasizes the importance of early detection and the potential use of p16INK4A and other clinical variables to stratify OSCC patients with high risks of recurrence and worse overall survivals.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
8ms
HPV related p16INK4A and HSV in benign and potentially malignant oral mucosa pathologies. (PubMed, BMC Oral Health)
HSV and p16INK4A positivity in relation to diagnosis of the biopsies showed statistically most often p16INK4A in OLP and fibroma. The results of co-expression of p16INK4A and HSV in mucocele and fibroma in oral mucosa suggest a cooperation between the molecular alterations induced by these two viruses. Squamous papilloma samples positive for p16INK4A were also positive for HSV, suggesting that the putative pro-oncogenic action of HSV could be an early event.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
8ms
CDKN2A promoter methylation enhances self-renewal of glioblastoma stem cells and confers resistance to carmustine. (PubMed, Mol Biol Rep)
Our findings demonstrate that CDKN2A downregulation in glioblastoma cells is associated with decreased cell viability, enhanced drug resistance, increased self-renewal capacity, and altered expression of pluripotency markers. The observed CDKN2A expression changes are mediated by promoter methylation. These results highlight the potential role of CDKN2A as a therapeutic target and prognostic marker in glioblastoma.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CDKN1A (Cyclin-dependent kinase inhibitor 1A)
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CDKN2A overexpression • CDKN2A promoter methylation • CDKN2A expression
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carmustine
9ms
Hypoxia-induced immortalization of primary cells depends on Tfcp2L1 expression. (PubMed, Cell Death Dis)
Additionally, Tfcp2l1 can replicate the hypoxic effect of increasing cellular reprogramming. Altogether, our data suggest that the activation of Tfcp2l1 by hypoxia contributes to immortalization prior to malignant transformation, facilitating tumorigenesis and dedifferentiation by regulating Sox2, Sox9, and Jarid2.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • HIF1A (Hypoxia inducible factor 1, alpha subunit) • SOX2 • SOX9 (SRY-Box Transcription Factor 9) • CDKN1A (Cyclin-dependent kinase inhibitor 1A) • JARID2 (Jumonji And AT-Rich Interaction Domain Containing 2) • NANOG (Nanog Homeobox)
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HIF1A expression • CDKN2A expression
9ms
Villosol reverses 5-FU resistance in colorectal cancer by inhibiting the CDKN2A gene regulated TP53-PI3K/Akt signaling axis. (PubMed, J Ethnopharmacol)
Changes in CDKN2A gene expression can be used to predict the response of CRC patients to 5-FU therapy. Additionally, inhibiting CDKN2A activation with Villosol may present a new approach to overcoming 5-FU resistance in clinical settings.
Journal
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TP53 (Tumor protein P53) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A overexpression • TP53 expression • CDKN2A expression
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5-fluorouracil
10ms
Autophagy-related risk signature based on CDNK2A to facilitate survival prediction of patients with endometrial cancer. (PubMed, J Gene Med)
CDKN2A is a prognostic factor and therapeutic target in EC, and is likely associated with the tumor immune landscape and autophagy.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • PTK6 (Protein Tyrosine Kinase 6)
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CDKN2A expression
10ms
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A overexpression • CDKN2A expression
12ms
Differential expression of BCL11b and CDKN2A in CD30-positive peripheral T cell lymphoma: Retrospective study. (PubMed, Medicine (Baltimore))
These results indicate that BCL11b may be involved in CD30 differentiation and PTCL prognosis. The detection and targeting of BCL11b and CD30 may provide new strategies for the treatment and classification of PTCL.
Retrospective data • Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • TNFRSF8 (TNF Receptor Superfamily Member 8) • BCL11B (BAF Chromatin Remodeling Complex Subunit BCL11B)
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TNFRSF8 positive • TNFRSF8 expression • TNFRSF8 negative • CDKN2A expression
almost1year
High expression of CDKN2A is associated with poor prognosis in colorectal cancer and may guide PD-1-mediated immunotherapy. (PubMed, BMC Cancer)
Our study revealed that high CDKN2A expression in CRC is a potentially valuable prognostic biomarker, which may guide PD-1-mediated immunotherapy.
Journal • PD(L)-1 Biomarker • IO biomarker
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TP53 (Tumor protein P53) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CD8 (cluster of differentiation 8) • CCND1 (Cyclin D1) • CDK4 (Cyclin-dependent kinase 4) • CDK6 (Cyclin-dependent kinase 6) • CD4 (CD4 Molecule) • UBE2I (Ubiquitin Conjugating Enzyme E2 I)
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MYC expression • CDKN2A expression
1year
THE STUDY OF PROGNOSTIC VALUE OF microRNAs (miR-10b AND -155) AND CDKN2A/P16INK4A IN ORAL SQUAMOUS CELL CARCINOMA. (PubMed, Exp Oncol)
The results indicate the relationship between miR-10b and -155 and the presence of lymph node metastases in OSCC patients, so these miRNAs can be considered as prognostic markers of the disease.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • MIR155 (MicroRNA 155) • MIR10B (MicroRNA 10b)
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miR-155 expression • CDKN2A expression
1year
MiR-484 promotes the malignant progression of glioma by inhibiting CDKN2A expression. (PubMed, Folia Neuropathol)
However, there was negative regulation of miR-484 and CDKN2A, and CDKN2A could partially offset the effect of miR-484. MiR-484 promoted cell migration, invasion and angiogenesis by inhibiting CDKN2A expression.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CDH1 (Cadherin 1) • VIM (Vimentin) • CDH2 (Cadherin 2) • MIR484 (MicroRNA 484)
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CDH1 expression • VEGFA expression • VIM expression • CDKN2A expression
1year
An EMT-related genes signature as a prognostic biomarker for patients with endometrial cancer. (PubMed, BMC Cancer)
Altogether, a novel four-EMT-related genes signature was a potential biomarker for EC prognosis. These findings might help to ameliorate the individualized prognostication and therapeutic treatment of EC patients.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • SIRT2 (Sirtuin 2)
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CDKN2A expression
1year
A Phase 1 Study in Patients With HPV16+ Recurrent/ Metastatic Head and Neck Squamous Cell Carcinoma (clinicaltrials.gov)
P1, N=85, Active, not recruiting, Cue Biopharma | Recruiting --> Active, not recruiting | Trial primary completion date: Jun 2023 --> Sep 2023
Enrollment closed • Trial primary completion date • Combination therapy • Metastases
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CTLA4 (Cytotoxic T-Lymphocyte Associated Protein 4)
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PD-L1 expression • CDKN2A expression
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Keytruda (pembrolizumab) • CUE-101
over1year
Importance of HPV status and p16 for the prognosis of penile carcinoma (PubMed, Aktuelle Urol)
HPV status alone seems to be lacking prognostic relevance. In contrast, p16 status was confirmed as an independent prognostic factor. Thus, the expression of p16INK4a is associated with a significantly better MFS. Especially in HPV-negative tumours, the p16 status should be evaluated with regard to the prognostic value and thus also with a view to the treatment decision.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A negative • CDKN2A expression
over1year
The Significance of BAP1 and MTAP/CDKN2A Expression in Well-Differentiated Papillary Mesothelial TUmour: A Series of 21 Cases (IASLC-WCLC 2023)
Asymptomatic lesions with typical histological features and intact BAP1 and MTAP appear to have a low risk of progression. Cases with WDPMT morphology but loss of BAP1 should be classified as papillary MIS. There is a risk of progression to mesothelioma.
Clinical • IO biomarker
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • MTAP (Methylthioadenosine Phosphorylase) • BAP1 (BRCA1 Associated Protein 1)
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CDKN2A expression
over1year
Surgery
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
over1year
A nomogram based on cuproptosis-related genes predicts 7-year relapse-free survival in patients with estrogen receptor-positive early breast cancer. (PubMed, Front Oncol)
The area under the receiver operating characteristic (ROC) curve (AUC) of the nomogram was significantly higher than the AUC of the CRG score at 7 years. The CRG score, combined with other clinical features, could afford a practical long-term outcome predictor in patients with ER+ EBC.
Journal
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ER (Estrogen receptor) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • FDX1 (Ferredoxin 1) • LIAS (Lipoic Acid Synthetase) • LIPT1 (Lipoyltransferase 1)
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ER positive • CDKN2A expression
over1year
A gut microbiota rheostat to forecast response to PDL1-VEGF blockade in mesothelioma. (ASCO 2023)
We therefore addressed this knowledge gap through multi-omic interrogation of tumours from patients enrolled into arm 4 of the Mesothelioma Stratified Therapy umbrella trial (NCT03654833, MiST4), a multi-centre single arm phase IIA trial of atezolizumab and bevacizumab in patients with relapsed mesothelioma. We propose a model in which interacting tumour intrinsic and extrinsic factors correlate with response to PDL1-VEGF inhibition in patients with mesothelioma. Gut microbiota composition represents a new, potentially modifiable target with potential to improve immunotherapy outcomes in patients with mesothelioma. Clinical trial information: NCT03654833.
Tumor mutational burden • PD(L)-1 Biomarker • IO biomarker • Gut Microbiota
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TMB (Tumor Mutational Burden) • HRD (Homologous Recombination Deficiency) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CD8 (cluster of differentiation 8) • BAP1 (BRCA1 Associated Protein 1) • CD68 (CD68 Molecule)
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PD-L1 expression • HRD • TMB-L • CDKN2A deletion • CDKN2A expression
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PD-L1 IHC 22C3 pharmDx
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Avastin (bevacizumab) • Tecentriq (atezolizumab)