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BIOMARKER:

CDKN2A expression

i
Other names: CDKN2A, ARF, CDK4I, CDKN2, CMM2, INK4, INK4a, MLM, MTS1, p14, p14ARF, p16, p16INK4a, p19, p19Arf, Cyclin-dependent kinase inhibitor 2A
Entrez ID:
Related biomarkers:
Associations
12d
A Phase 1 Study in Patients With HPV16+ Recurrent/ Metastatic Head and Neck Squamous Cell Carcinoma (clinicaltrials.gov)
P1, N=85, Active, not recruiting, Cue Biopharma | Trial completion date: Dec 2023 --> May 2025 | Trial primary completion date: Sep 2023 --> Nov 2024
Trial completion date • Trial primary completion date • Combination therapy • Metastases
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CTLA4 (Cytotoxic T-Lymphocyte Associated Protein 4)
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PD-L1 expression • CDKN2A expression
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Keytruda (pembrolizumab) • CUE-101
13d
Determining the relationship of p16INK4a and additional molecular markers of aging with clinical frailty in hematologic malignancy. (PubMed, J Cancer Surviv)
We developed the I2 index to quantify impairments across geriatric domains and discovered that PBTL p16, Hannum, PhenoAge, and DunedinPACE are promising indicators of frailty in HM.
Journal • IO biomarker
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
14d
Human Papillomavirus Is Rare and Does Not Correlate with p16INK4A Expression in Non-Small-Cell Lung Cancer in a Jordanian Subpopulation. (PubMed, Medicina (Kaunas))
HPV positivity is rare in NSCLC among a Jordanian subpopulation. P16 INK4a reliability as a surrogate marker for HPV infection in lung cancer must be revisited.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
25d
De novo purine metabolism is a metabolic vulnerability of cancers with low p16 expression. (PubMed, Cancer Res Commun)
Finally, tumors with p16 knockdown were more sensitive to the anti-folate methotrexate in vivo than control tumors. Together, our data provide evidence to reevaluate the utility of these drugs in patients with p16/CDKN2Alow tumors as loss of p16/CDKN2A may provide a therapeutic window for these agents.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
|
CDKN2A expression
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methotrexate
26d
Three Schedules of CUE-101 Administered Before Surgery or Definitive Chemoradiation Therapy in HLA-A*0201 Positive Patients With Locally Advanced, HPV16-Positive Oropharyngeal Squamous-Cell Carcinoma (clinicaltrials.gov)
P2, N=30, Recruiting, Washington University School of Medicine | Trial completion date: Oct 2025 --> Oct 2027 | Trial primary completion date: Oct 2025 --> Oct 2027
Trial completion date • Trial primary completion date • Surgery • Metastases
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CD8 (cluster of differentiation 8) • IFNG (Interferon, gamma)
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CDKN2A expression
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CUE-101
1m
A Cuproptosis-Related gene Signature as a Prognostic Biomarker in Thyroid Cancer Based on Transcriptomics. (PubMed, Biochem Genet)
Moreover, we discovered that CDKN2A expression was linked to a dysfunctional tumor immune microenvironment. The study shows that CDKN2A, a cuproptosis-related gene, can be used as a prognostic marker for thyroid cancer.
Journal • Gene Signature
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
1m
Association between serum P16ink4A concentration and CIN and cervical cancer among women attending a cervical cancer clinic in western Uganda: A case control study. (PubMed, Gynecol Oncol Rep)
Serum P16ink4A may likely be associated with cervical lesions especially CC in our study population and this may aid detection of such lesions. Diagnostic utility studies for circulating P16ink4A in detection of cervical cancer are recommended.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
|
CDKN2A expression
1m
High P16INK4A Expression, Keratinizing Features, and Surgical Margin-Free Status are Associated with Improved Survival in Patients with Oral Squamous Cell Carcinomas. (PubMed, Asian Pac J Cancer Prev)
P16INK4A positive staining, early stages, negative cervical lymph node infiltration, and free-surgical margins are associated with better prognosis in OSCC patients. The study emphasizes the importance of early detection and the potential use of p16INK4A and other clinical variables to stratify OSCC patients with high risks of recurrence and worse overall survivals.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
|
CDKN2A expression
2ms
HPV related p16INK4A and HSV in benign and potentially malignant oral mucosa pathologies. (PubMed, BMC Oral Health)
HSV and p16INK4A positivity in relation to diagnosis of the biopsies showed statistically most often p16INK4A in OLP and fibroma. The results of co-expression of p16INK4A and HSV in mucocele and fibroma in oral mucosa suggest a cooperation between the molecular alterations induced by these two viruses. Squamous papilloma samples positive for p16INK4A were also positive for HSV, suggesting that the putative pro-oncogenic action of HSV could be an early event.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A expression
2ms
CDKN2A promoter methylation enhances self-renewal of glioblastoma stem cells and confers resistance to carmustine. (PubMed, Mol Biol Rep)
Our findings demonstrate that CDKN2A downregulation in glioblastoma cells is associated with decreased cell viability, enhanced drug resistance, increased self-renewal capacity, and altered expression of pluripotency markers. The observed CDKN2A expression changes are mediated by promoter methylation. These results highlight the potential role of CDKN2A as a therapeutic target and prognostic marker in glioblastoma.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CDKN1A (Cyclin-dependent kinase inhibitor 1A)
|
CDKN2A overexpression • CDKN2A promoter methylation • CDKN2A expression
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carmustine
2ms
Hypoxia-induced immortalization of primary cells depends on Tfcp2L1 expression. (PubMed, Cell Death Dis)
Additionally, Tfcp2l1 can replicate the hypoxic effect of increasing cellular reprogramming. Altogether, our data suggest that the activation of Tfcp2l1 by hypoxia contributes to immortalization prior to malignant transformation, facilitating tumorigenesis and dedifferentiation by regulating Sox2, Sox9, and Jarid2.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • HIF1A (Hypoxia inducible factor 1, alpha subunit) • SOX2 • SOX9 (SRY-Box Transcription Factor 9) • CDKN1A (Cyclin-dependent kinase inhibitor 1A) • JARID2 (Jumonji And AT-Rich Interaction Domain Containing 2) • NANOG (Nanog Homeobox)
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HIF1A expression • CDKN2A expression
3ms
Villosol reverses 5-FU resistance in colorectal cancer by inhibiting the CDKN2A gene regulated TP53-PI3K/Akt signaling axis. (PubMed, J Ethnopharmacol)
Changes in CDKN2A gene expression can be used to predict the response of CRC patients to 5-FU therapy. Additionally, inhibiting CDKN2A activation with Villosol may present a new approach to overcoming 5-FU resistance in clinical settings.
Journal
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TP53 (Tumor protein P53) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A overexpression • TP53 expression • CDKN2A expression
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5-fluorouracil
3ms
Autophagy-related risk signature based on CDNK2A to facilitate survival prediction of patients with endometrial cancer. (PubMed, J Gene Med)
CDKN2A is a prognostic factor and therapeutic target in EC, and is likely associated with the tumor immune landscape and autophagy.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • PTK6 (Protein Tyrosine Kinase 6)
|
CDKN2A expression
4ms
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A overexpression • CDKN2A expression
6ms
Differential expression of BCL11b and CDKN2A in CD30-positive peripheral T cell lymphoma: Retrospective study. (PubMed, Medicine (Baltimore))
These results indicate that BCL11b may be involved in CD30 differentiation and PTCL prognosis. The detection and targeting of BCL11b and CD30 may provide new strategies for the treatment and classification of PTCL.
Retrospective data • Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • TNFRSF8 (TNF Receptor Superfamily Member 8) • BCL11B (BAF Chromatin Remodeling Complex Subunit BCL11B)
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TNFRSF8 positive • TNFRSF8 expression • TNFRSF8 negative • CDKN2A expression
6ms
High expression of CDKN2A is associated with poor prognosis in colorectal cancer and may guide PD-1-mediated immunotherapy. (PubMed, BMC Cancer)
Our study revealed that high CDKN2A expression in CRC is a potentially valuable prognostic biomarker, which may guide PD-1-mediated immunotherapy.
Journal • PD(L)-1 Biomarker • IO biomarker
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TP53 (Tumor protein P53) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CD8 (cluster of differentiation 8) • CCND1 (Cyclin D1) • CDK4 (Cyclin-dependent kinase 4) • CDK6 (Cyclin-dependent kinase 6) • CD4 (CD4 Molecule) • UBE2I (Ubiquitin Conjugating Enzyme E2 I)
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MYC expression • CDKN2A expression
6ms
THE STUDY OF PROGNOSTIC VALUE OF microRNAs (miR-10b AND -155) AND CDKN2A/P16INK4A IN ORAL SQUAMOUS CELL CARCINOMA. (PubMed, Exp Oncol)
The results indicate the relationship between miR-10b and -155 and the presence of lymph node metastases in OSCC patients, so these miRNAs can be considered as prognostic markers of the disease.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • MIR155 (MicroRNA 155) • MIR10B (MicroRNA 10b)
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miR-155 expression • CDKN2A expression
7ms
MiR-484 promotes the malignant progression of glioma by inhibiting CDKN2A expression. (PubMed, Folia Neuropathol)
However, there was negative regulation of miR-484 and CDKN2A, and CDKN2A could partially offset the effect of miR-484. MiR-484 promoted cell migration, invasion and angiogenesis by inhibiting CDKN2A expression.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CDH1 (Cadherin 1) • VIM (Vimentin) • CDH2 (Cadherin 2) • MIR484 (MicroRNA 484)
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CDH1 expression • VEGFA expression • VIM expression • CDKN2A expression
8ms
An EMT-related genes signature as a prognostic biomarker for patients with endometrial cancer. (PubMed, BMC Cancer)
Altogether, a novel four-EMT-related genes signature was a potential biomarker for EC prognosis. These findings might help to ameliorate the individualized prognostication and therapeutic treatment of EC patients.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • SIRT2 (Sirtuin 2)
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CDKN2A expression
8ms
A Phase 1 Study in Patients With HPV16+ Recurrent/ Metastatic Head and Neck Squamous Cell Carcinoma (clinicaltrials.gov)
P1, N=85, Active, not recruiting, Cue Biopharma | Recruiting --> Active, not recruiting | Trial primary completion date: Jun 2023 --> Sep 2023
Enrollment closed • Trial primary completion date • Combination therapy • Metastases
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CTLA4 (Cytotoxic T-Lymphocyte Associated Protein 4)
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PD-L1 expression • CDKN2A expression
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Keytruda (pembrolizumab) • CUE-101
9ms
Importance of HPV status and p16 for the prognosis of penile carcinoma (PubMed, Aktuelle Urol)
HPV status alone seems to be lacking prognostic relevance. In contrast, p16 status was confirmed as an independent prognostic factor. Thus, the expression of p16INK4a is associated with a significantly better MFS. Especially in HPV-negative tumours, the p16 status should be evaluated with regard to the prognostic value and thus also with a view to the treatment decision.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A negative • CDKN2A expression
10ms
The Significance of BAP1 and MTAP/CDKN2A Expression in Well-Differentiated Papillary Mesothelial TUmour: A Series of 21 Cases (IASLC-WCLC 2023)
Asymptomatic lesions with typical histological features and intact BAP1 and MTAP appear to have a low risk of progression. Cases with WDPMT morphology but loss of BAP1 should be classified as papillary MIS. There is a risk of progression to mesothelioma.
Clinical • IO biomarker
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • MTAP (Methylthioadenosine Phosphorylase) • BAP1 (BRCA1 Associated Protein 1)
|
CDKN2A expression
11ms
Surgery
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
|
CDKN2A expression
12ms
A nomogram based on cuproptosis-related genes predicts 7-year relapse-free survival in patients with estrogen receptor-positive early breast cancer. (PubMed, Front Oncol)
The area under the receiver operating characteristic (ROC) curve (AUC) of the nomogram was significantly higher than the AUC of the CRG score at 7 years. The CRG score, combined with other clinical features, could afford a practical long-term outcome predictor in patients with ER+ EBC.
Journal
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ER (Estrogen receptor) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • FDX1 (Ferredoxin 1) • LIAS (Lipoic Acid Synthetase) • LIPT1 (Lipoyltransferase 1)
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ER positive • CDKN2A expression
1year
A gut microbiota rheostat to forecast response to PDL1-VEGF blockade in mesothelioma. (ASCO 2023)
We therefore addressed this knowledge gap through multi-omic interrogation of tumours from patients enrolled into arm 4 of the Mesothelioma Stratified Therapy umbrella trial (NCT03654833, MiST4), a multi-centre single arm phase IIA trial of atezolizumab and bevacizumab in patients with relapsed mesothelioma. We propose a model in which interacting tumour intrinsic and extrinsic factors correlate with response to PDL1-VEGF inhibition in patients with mesothelioma. Gut microbiota composition represents a new, potentially modifiable target with potential to improve immunotherapy outcomes in patients with mesothelioma. Clinical trial information: NCT03654833.
Tumor mutational burden • PD(L)-1 Biomarker • IO biomarker • Gut Microbiota
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TMB (Tumor Mutational Burden) • HRD (Homologous Recombination Deficiency) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CD8 (cluster of differentiation 8) • BAP1 (BRCA1 Associated Protein 1) • CD68 (CD68 Molecule)
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PD-L1 expression • HRD • TMB-L • CDKN2A deletion • CDKN2A expression
|
PD-L1 IHC 22C3 pharmDx
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Avastin (bevacizumab) • Tecentriq (atezolizumab)
1year
A Selective ALDH1A3 Inhibitor Impairs Mesothelioma 3-D Multicellular Spheroid Growth and Neutrophil Recruitment. (PubMed, Int J Mol Sci)
Furthermore, we demonstrate that in response to ALDH1A3 inhibition, CDKN2A loss skewed cell fate from senescence to apoptosis. Dissecting the role of ALDH1A3 isoform in MPM cells and tumour microenvironment can open new fronts in the treatment of this cancer.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • IL6 (Interleukin 6) • CXCL8 (Chemokine (C-X-C motif) ligand 8) • ALDH1A3 (Aldehyde Dehydrogenase 1 Family Member A3)
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CXCL8 expression • IL6 expression • CDKN2A expression
1year
Comprehensive analyses of cuproptosis-related gene CDKN2A on prognosis and immunologic therapy in human tumors. (PubMed, Medicine (Baltimore))
The study deeply defined the concrete roles of cuproptosis-related gene CDKN2A in tumorigenesis. The results provided new insights and pieces of evidence for treatment.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
|
CDKN2A expression
1year
A Phase 1 Study in Patients With HPV16+ Recurrent/ Metastatic Head and Neck Squamous Cell Carcinoma (clinicaltrials.gov)
P1, N=85, Recruiting, Cue Biopharma | Trial completion date: Aug 2023 --> Dec 2023 | Trial primary completion date: Feb 2023 --> Jun 2023
Trial completion date • Trial primary completion date • Combination therapy • Metastases
|
CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CTLA4 (Cytotoxic T-Lymphocyte Associated Protein 4)
|
PD-L1 expression • CDKN2A expression
|
Keytruda (pembrolizumab) • CUE-101
1year
SKIN EXPRESSION OF P16[^]INK4A[/^], A BIOMARKER FOR CELLULAR SENESCENCE, DOES NOT PREDICT FRAILTY OR TREATMENT OUTCOME IN NEWLY DIAGNOSED MULTIPLE MYELOMA (EMN 2023)
p16INK4a expression in the skin is not associated with frailty level or treatment outcome in intermediate fit and frail NDMM patients. Recent literature suggests that p16INK4a mRNA expression in peripheral T cells could be a more accurate marker for cellular senescence. Based on our results, we discourage the evaluation of p16INK4a protein levels in skin biopsies to improve frailty assessment in older patients with newly diagnosed MM.
Clinical
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
|
CDKN2A expression
1year
Senescent tumor cells are frequently present at the invasion front - implications for improving disease control in patients with locally advanced prostate cancer. (PubMed, Pathobiology)
 This proof-of-concept study shows that invading prostate cancer cells frequently show signs of cellular senescence. This finding may open new avenues for neoadjuvant and adjuvant treatment concepts in men with locally advanced prostate cancer.
Journal • Tumor cell • Metastases
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
|
CDKN2A expression
1year
Characterization of Cellular Senescence in a Mouse Model of Spontaneous Ovarian Endometrioma. (SRI 2023)
Increasing expression of Cdkn2a in control ovaries over time suggests a critical and yet unstudied role for senescence in folliculogenesis. The increasing expression of Cdkn2a in AKA ovaries suggests a potential role for senescence in endometriosis progression and, potentially, attenuation of the development of ovarian cancer. Primary granulosa cells offer an additional model to study these innovative results further.
Preclinical
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KRAS (KRAS proto-oncogene GTPase) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • ARID1A (AT-rich interaction domain 1A) • AMHR2 (Anti-Mullerian Hormone Receptor Type 2)
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KRAS G12D • KRAS G12 • KRAS overexpression • KRAS deletion • CDKN2A expression • KRAS expression
over1year
rs77283072 influences breast cancer susceptibility by regulating CDKN2A expression. (PubMed, Oncol Lett)
Furthermore, expression quantitative trait locus analysis demonstrated that the expression of CDKN2A was dependent on the genotype of rs77283072. Taken together, the findings of the present study provided novel insights into the mechanism underlying how the genetic variation in this locus was able to influence breast cancer susceptibility and further the treatment for this disease.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
|
CDKN2A expression
over1year
Cuproptosis-associated CDKN2A is targeted by plicamycin to regulate the microenvironment in patients with head and neck squamous cell carcinoma. (PubMed, Front Genet)
And plicamycin inhibits the progression of HNSCC in cellular assays. In conclusion, this study elucidated a potential mechanism of action of the cuproptosis-associated gene CDKN2A in HNSCC and revealed that plicamycin targets CDKN2A to improve the prognosis of patients.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
|
CDKN2A expression
over1year
A Single-centre Prospective Study to Explore the Role of Frailty in Patients With Multiple Myeloma. (clinicaltrials.gov)
P=N/A, N=110, Active, not recruiting, Manchester University NHS Foundation Trust | Trial completion date: Jun 2022 --> Oct 2023 | Trial primary completion date: Jun 2022 --> Oct 2023
Trial completion date • Trial primary completion date
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
|
CDKN2A expression
over1year
ACTR5 controls CDKN2A and tumor progression in an INO80-independent manner. (PubMed, Sci Adv)
Last, our study revealed the synergism between ACTR5/IES6-targeting and pharmacological inhibition of CDK in treating HCC. These results indicate that the dynamic interplay between epigenetic regulators, tumor suppressors, and cell cycle machinery could provide novel opportunities for combinational HCC therapy.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
|
CDKN2A expression
over1year
Upregulation of p16INK4A in Peripheral White Blood Cells as a Novel Screening Marker for Colorectal Carcinoma. (PubMed, Asian Pac J Cancer Prev)
The significant increase of p16 INK4A expression level in peripheral immune cells represents potential for use as a CRC screening marker.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • PTPRC (Protein Tyrosine Phosphatase Receptor Type C) • CD14 (CD14 Molecule) • NDUFA2 (NADH:Ubiquinone Oxidoreductase Subunit A2)
|
CDKN2A expression
over1year
CDKN2A EXPRESSION AND RESPONSE TO INTERFERON ALPHA GENE THERAPY IN BLADDER CANCER CELL LINES (SUO 2022)
We identified that homozygous deletion of CDKN2a to be a predictor of response in most UroA subtype tumors, while some cell lines were inherently resistant possibly from elevated EGFR expression. Identifying gene signatures that are predictive of response will be useful in identifying patients that are likely to respond to IFNα therapy.
Preclinical
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EGFR (Epidermal growth factor receptor) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • IFNA1 (Interferon Alpha 1)
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EGFR expression • EGFR overexpression • CDKN2A deletion • CDKN2A expression
over1year
Exploration and validation of hub genes in lung adenocarcinoma based on bioinformatics analysis. (PubMed, Transl Cancer Res)
TISIDB analysis indicated that AKT1, CD44, and CDKN2A expression had a strong relationship with immune infiltration in lung adenocarcinoma. These hub genes, AKT1, CD44, and CDKN2A, may represent tumor biomarkers that may contribute to the understanding, diagnosis, and treatment of lung adenocarcinoma.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • AKT1 (V-akt murine thymoma viral oncogene homolog 1) • CD44 (CD44 Molecule)
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CD44 expression • CDKN2A expression