^
1m
Intratumoral administration of poly-ICLC enhances the antitumor effects of anti-PD-1. (PubMed, J Hepatobiliary Pancreat Sci)
Combination therapy with poly-ICLC, especially through IT route, and anti-PD-1 provides significantly greater antitumor effects than anti-PD-1 monotherapy in syngeneic mouse models of HCC.
Journal
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CD8 (cluster of differentiation 8) • IFNG (Interferon, gamma)
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nCounter® PanCancer IO 360™ Panel
|
Hiltonol (poly-ICLC)
1m
Transcriptomic profiling of primary and secondary lesions identified a potential crosstalk between MARCO+ macrophages and deregulated cancer-cell proliferation in mediating progression and therapy response of advanced clear cell renal cell carcinoma. (EMUC 2024)
Conclusions Overall, these preliminary data reveal a potential crosstalk between deregulated cancer cell proliferation and MARCO+Mφs in mediating disease progression and ICI resistance of ccRCC. Mechanistic experiments will be performed to confirm this assumption and to test whether targeting cancer cell-deregulated proliferation (e.g. by FDA-approved CDK4/6-TAs) could reshape ccRCC-mediated Mφ polarization and improve ICI efficacy.
IO biomarker • Metastases
|
CDK4 (Cyclin-dependent kinase 4)
|
nCounter® PanCancer IO 360™ Panel
2ms
Impact of Inflammation, Tumor and Product Attributes on Clinical Outcomes in Patients with Relapsed/Refractory Follicular Lymphoma Treated with Axicabtagene Ciloleucel (ASH 2024)
Conclusions : These findings underscore the significance of pre-treatment systemic inflammation (e.g. serum TNFa levels), product T cell phenotype, TMTV, CAR T-cell expansion, tumor IFN signaling and FLIPI as independent factors associated with clinical outcomes in patients with r/r FL treated with axi-cel. These results offer insights into mechanisms of resistance and toxicity, risk stratification, combination therapy and development of next-generation CAR-T therapy for patients with r/r FL.
Clinical • Clinical data • IO biomarker
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CD19 (CD19 Molecule) • IFNG (Interferon, gamma) • LAG3 (Lymphocyte Activating 3) • TNFA (Tumor Necrosis Factor-Alpha) • HAVCR2 (Hepatitis A Virus Cellular Receptor 2) • CCR7 (Chemokine (C-C motif) receptor 7)
|
CD19 expression
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nCounter® PanCancer IO 360™ Panel
|
Yescarta (axicabtagene ciloleucel)
2ms
T/NK Cell-Associated Transcriptomic Profile Informs Response to FLT3 Inhibitors in Acute Myeloid Leukemia (ASH 2024)
We then profiled a wet-lab cohort of 37 FLT3-mut AML patients treated either with Midostaurin plus chemotherapy (M) or Gilteritinib (G) at Bologna Hematology Institute by using the PanCancer IO 360 Panel (NanoString Technologies, San Diego, CA). S.R. & A.C. equally contributed
FLT3 (Fms-related tyrosine kinase 3) • CD8 (cluster of differentiation 8) • CD4 (CD4 Molecule) • GLI2 (GLI Family Zinc Finger 2)
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FLT3 mutation
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nCounter® PanCancer IO 360™ Panel
|
Xospata (gilteritinib) • Rydapt (midostaurin)
2ms
First-line (1L) ribociclib (RIB) + endocrine therapy (ET) vs combination chemotherapy (combo CT) in clinically aggressive HR+/HER2- advanced breast cancer (ABC): a subgroup analysis of RIGHT Choice by intrinsic subtype & gene & signature expression. (SABCS 2024)
Methods Pre/perimenopausal pts with no prior systemic therapy for aggressive HR+/HER2− ABC were randomized 1:1 to RIB + letrozole/anastrozole + goserelin or physician's choice of combo CT. Contrary results in the CT arm suggest that these signatures warrant further studies on their potential predictive value. These data are hypothesis generating and should be interpreted with caution due to small sample sizes.
Clinical • Metastases
|
HER-2 (Human epidermal growth factor receptor 2) • ER (Estrogen receptor)
|
HER-2 negative • ER expression • ER overexpression • ER-L
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nCounter® Breast Cancer 360™ Panel • nCounter® PanCancer IO 360™ Panel
|
Kisqali (ribociclib) • letrozole • anastrozole • goserelin acetate
2ms
The A2AR antagonist inupadenant promotes humoral responses in patients (ESMO-IO 2024)
These effects may play a substantial role in delaying progression in end-stage patients. Additional work is ongoing to demonstrate this new mechanism of action across clinical settings and patient populations.
Clinical
|
CXCL13 (Chemokine (C-X-C motif) ligand 13) • ADORA2A (Adenosine A2a Receptor)
|
CXCL13 expression
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nCounter® PanCancer IO 360™ Panel
|
inupadenant (EOS-850)
3ms
High-dimensional, single-cell analysis and transcriptional profiling reveal novel correlatives of response to PARP inhibition plus PD-1 blockade in triple-negative breast cancer (SITC 2024)
Background TOPACIO was a phase I/II study evaluating the PARP inhibitor (PARPi) niraparib in combination with the anti-PD-1 antibody pembrolizumab in patients with locally advanced or metastatic triple-negative breast cancer (TNBC, n=55), irrespective of BRCA mutation status. The study protocol and/or other relevant documents received central approval by the Dana-Farber institutional review board and/or relevant competent authorities at each site. All patients supplied written informed consent for their participation in the study.
BRCA Biomarker • PARP Biomarker • PD(L)-1 Biomarker • IO biomarker
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PD-L1 (Programmed death ligand 1) • CD20 (Membrane Spanning 4-Domains A1) • CD8 (cluster of differentiation 8) • BRCA (Breast cancer early onset) • CD163 (CD163 Molecule) • PTPRC (Protein Tyrosine Phosphatase Receptor Type C) • CD68 (CD68 Molecule)
|
BRCA wild-type • BRCA mutation • PTPRC expression
|
nCounter® Breast Cancer 360™ Panel • nCounter® PanCancer IO 360™ Panel
|
Keytruda (pembrolizumab) • Zejula (niraparib)
3ms
Targeting lipid metabolism to improve PARP inhibitor response in BRCA-associated TNBC (SITC 2024)
Methods Transcriptomic analysis of baseline or on-treatment (PARPi, talazoparib) biopsies from patients with BRCA-associated TNBC from the TALAVE clinical trial (NCT03964532) were assessed using the NanoString-IO360™ and Digital Spatial Profiling (DSP) platforms. Tumor-bearing mice (K14-Cre/Brca1f/f/p53f/f ) were treated with vehicle or PARPi (olaparib) for 5 days and gene expression profiling, flow cytometry and mass spectrometry-based metabolome analysis were utilized to determine the metabolic profile of tumors. To inhibit lipid synthesis, mice were treated with fatostatin (SREBP1 inhibitor) or denifanstat (FASN inhibitor)...Ethics Approval The present study was approved by BWH CMM IACUC, protocol number is 2020N000142 and by Dana-Farber Cancer Institute, protocol number is 20–627. Study drugs were provided by Pfizer, as part of an alliance between Pfizer and the healthcare business of Merck KGaA, Darmstadt, Germany (CrossRef Funder ID: 10.13039/100009945).
BRCA Biomarker • PARP Biomarker • PD(L)-1 Biomarker • IO biomarker
|
PD-L1 (Programmed death ligand 1) • CD8 (cluster of differentiation 8) • BRCA (Breast cancer early onset)
|
PD-L1 expression
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nCounter® PanCancer IO 360™ Panel
|
Lynparza (olaparib) • Talzenna (talazoparib) • denifanstat (TVB-2640)
3ms
Clinical • P1 data • Metastases
|
METTL3 (Methyltransferase Like 3)
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nCounter® PanCancer IO 360™ Panel
|
STC-15
3ms
Gene signatures predict immune-related skin adverse events in melanoma patients (SITC 2024)
Methods Gene profiling analysis was performed using NanoString IO360 panel from PBMCs of melanoma patients treated with anti-PD1 (pembrolizumab/nivolumab) in both clinical setting (adjuvant and first line therapy). Conclusions In this retrospective study, we identify gene signatures model associated with the onset of skin toxicities related to anti-PD1 treatment in stage III/IV unresectable and resected stage III melanoma patients. Further investigations are needed in order to validate the signature in an independent dataset.View this table:View inline View popup Download powerpoint Abstract 1172 Table 1 Patient characterisitics
Clinical • Adverse events • Gene Signature • PD(L)-1 Biomarker • IO biomarker
|
EGFR (Epidermal growth factor receptor) • ER (Estrogen receptor) • TNFRSF8 (TNF Receptor Superfamily Member 8) • HIF1A (Hypoxia inducible factor 1, alpha subunit) • CXCR3 (C-X-C Motif Chemokine Receptor 3) • ADAM12 (ADAM Metallopeptidase Domain 12) • DUSP5 (Dual Specificity Phosphatase 5) • ITGA1 (Integrin Subunit Alpha 1)
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nCounter® PanCancer IO 360™ Panel
|
Keytruda (pembrolizumab) • Opdivo (nivolumab)
3ms
Aristolochic acid-related renal cell carcinoma exhibits a distinct tumor-immune microenvironment favoring response to immune checkpoint blockade. (PubMed, J Pathol)
© 2024 The Author(s). The Journal of Pathology published by John Wiley & Sons Ltd on behalf of The Pathological Society of Great Britain and Ireland
Checkpoint inhibition • Journal • Tumor mutational burden • Checkpoint block
|
TMB (Tumor Mutational Burden) • CD8 (cluster of differentiation 8) • BATF3 (Basic Leucine Zipper ATF-Like Transcription Factor 3)
|
TMB-H
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nCounter® PanCancer IO 360™ Panel
3ms
Unravelling radiobiological and immunological mechanisms driving effective CAIX-TRT and ICI combination therapy (EANM 2024)
These findings provide valuable insights into the temporal dynamics and immune responses within the tumour microenvironment following TRT and ICI combination therapy. Based on these results, future research should prioritize investigating the role of specific immune cell subsets and optimizing treatment application, particularly focusing on dosing and timing strategies.
Combination therapy • PD(L)-1 Biomarker • IO biomarker
|
PD-L1 (Programmed death ligand 1) • CTLA4 (Cytotoxic T-Lymphocyte Associated Protein 4) • CA9 (Carbonic anhydrase 9)
|
PD-L1 expression • CTLA4 expression
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nCounter® PanCancer IO 360™ Panel
3ms
FLT3 MUTATIONAL STATUS IS ASSOCIATED WITH DIFFERENCES IN ACUTE MYELOID LEUKEMIA IMMUNE TRANSCRIPTOMIC PROFILE IMPACTING ON RESPONSE TO FLT3 INHIBITORS (SIE 2024)
We then screened a cohort of FLT3-mut AML patients treated either with Midostaurin plus chemotherapy (M) or Gilteritinib (G) at Bologna Hematology Institute by using the PanCancer IO 360 Panel (NanoS-tring GEA). This study highlights how FLT3 mutational status is associated with T-Cell activation and AML maturation state. Differences in immune transcriptomic profile impact on FLT3i response.
FLT3 (Fms-related tyrosine kinase 3) • CD8 (cluster of differentiation 8) • CD4 (CD4 Molecule) • GLI2 (GLI Family Zinc Finger 2)
|
FLT3 mutation • CD8 expression
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nCounter® PanCancer IO 360™ Panel
|
Xospata (gilteritinib) • Rydapt (midostaurin)
3ms
Immunological and molecular profiling of cutaneous squamous cell carcinoma: A comparison of organ transplant recipients vs non-transplant recipients in an Asian cohort in Singapore (ESMO Asia 2024)
Conclusions Distinct gene expression pathways and immune subgroups were identified in cSCC, along with varied immunophenotypic and molecular signatures between OTR and NTR. These findings suggest the potential for stratified treatment based on specific immune profiles in cSCC.
Clinical
|
PTPRC (Protein Tyrosine Phosphatase Receptor Type C)
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nCounter® PanCancer IO 360™ Panel
3ms
A multi-omics approach using transcriptomic and spatial analysis to identify predictive immune biomarkers of response and toxicity following chemotherapy in head and neck cancers (EORTC-NCI-AACR 2024)
By combining a spatial approach with expression data for immune-related pathways and associated overall survival data, we provide an effective strategy and workflow for the identification of prognostic biomarkers in OSCC.
IO biomarker
|
nCounter® PanCancer IO 360™ Panel
5ms
Histopathological, Molecular and Clinical Profiling of Lymphoepithelioma-Like Carcinoma of the Bladder (LELC-B). (PubMed, Mod Pathol)
All LELC-B cases showed high TMB of 39 Mut/Mb (IQR 29-66). In conclusion, LELC-B is a highly immunogenic tumor, showing strong upregulation of PD1/PD-L1 and making ICI a promising treatment option.
Journal • Tumor mutational burden • PD(L)-1 Biomarker • IO biomarker
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PD-L1 (Programmed death ligand 1) • TMB (Tumor Mutational Burden) • CD8 (cluster of differentiation 8) • PD-1 (Programmed cell death 1) • CD163 (CD163 Molecule) • PTPRC (Protein Tyrosine Phosphatase Receptor Type C) • VIM (Vimentin) • FOXP3 (Forkhead Box P3)
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nCounter® PanCancer IO 360™ Panel
5ms
A pilot study of the immune microenvironment of GI neuroendocrine carcinoma. (PubMed, Endocr Relat Cancer)
Patients with a >6 month OS had tumors with elevated NK cell gene signatures compared to patients with poor survival. Further, the analysis revealed numerous differentially expressed genes based on patient age, tumor location, response to treatment, and OS which warrant future validation for assessing relationship with clinical outcomes in patients.
Journal • IO biomarker
|
nCounter® PanCancer IO 360™ Panel
5ms
Longitudinal biomarker analysis and outcomes for patients (pts) treated with neoadjuvant nivolumab (nivo) and relatlimab (rela) in surgically resectable melanoma (ESMO 2024)
The neoadjuvant platform offers unique insights into the tumor microenvironment and dynamics of the immune response over time. Our analysis reveals consistencies with previously published biomarkers associated with response to immune checkpoint inhibitors (IFN- γ) and provides insights into new biomarkers associated with response to nivo + rela, specifically B7-H3. Taken together, this work expands our insights into who may benefit from nivo + rela and provides insights into potentially actionable strategies to personalize tx approaches.
Clinical • PD(L)-1 Biomarker • IO biomarker
|
CD276 (CD276 Molecule)
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nCounter® PanCancer IO 360™ Panel
|
Opdivo (nivolumab) • relatlimab (BMS-986016)
5ms
Exploratory biomarker analysis of the NEONAX trial for response prediction to perioperative (PO) and adjuvant (A) Gem-nabPac chemotherapy (CTX) in resectable PDAC patients (rPDAC Pts) (ESMO 2024)
In our study, we have identified a favorable TiME for L-DFS rPDAC Pts under PO Gem-nabPac CTX. We further present minimal immune-related liquid biomarker signatures based on mELISA and ML for early prediction of Gem-nabPac CTX success in PO and A treatment settings, or for rPDAC Pts in general.
Clinical
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CD8 (cluster of differentiation 8) • CXCL9 (Chemokine (C-X-C motif) ligand 9) • CCL19 (C-C Motif Chemokine Ligand 19) • LGALS3 (Galectin 3) • GZMA (Granzyme A) • IL1A (Interleukin 1, alpha) • CCL21 (C-C Motif Chemokine Ligand 21) • CX3CL1 (C-X3-C Motif Chemokine Ligand 1) • IL1B (Interleukin 1, beta) • IL7 (Interleukin 7) • TSLP (Thymic Stromal Lymphopoietin) • CDH5 (Cadherin 5) • IL16 (Interleukin 16) • SELP (Selectin P)
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nCounter® PanCancer IO 360™ Panel
5ms
EXPLORATORY BIOMARKER ANALYSIS FOR PREDICTING THERAPY SUCCESS OF SECOND LINE NAL-IRI/5-FU/FA CHEMOTHERAPY IN METASTATIC PDAC PATIENTS BASED ON THE PREDICT TRIAL (AIO-PAK-0216) (UEGW 2024)
In our study, we have identified a favorable TiME for L-TTF mPDAC Pts (2nd line CTX) showing CD8 T cell inflamed ("hot") tumor tissues prior to 2nd line CTX. We further present a 9-marker liquid biomarker panel including 9 flow cytometry PBMC population gates for early prediction of 2nd line nal-IRI/5-FU/FA therapy success in mPDAC Pts. With our findings, we aim to advance the personalized treatment of mPDAC Pts e.g. by additionally exploring the potential for immunotherapy in patients with a positive marker signature.
Clinical • PD(L)-1 Biomarker • IO biomarker • Metastases
|
CD8 (cluster of differentiation 8) • PD-1 (Programmed cell death 1) • LAG3 (Lymphocyte Activating 3) • CTLA4 (Cytotoxic T-Lymphocyte Associated Protein 4) • TIGIT (T Cell Immunoreceptor With Ig And ITIM Domains 2) • IDO1 (Indoleamine 2,3-dioxygenase 1) • PTPRC (Protein Tyrosine Phosphatase Receptor Type C) • IL1R1 (Interleukin 1 receptor, type I) • CA 19-9 (Cancer antigen 19-9) • CD96 (CD96 Molecule) • NKG2D (killer cell lectin like receptor K1) • SELP (Selectin P)
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nCounter® PanCancer IO 360™ Panel
|
5-fluorouracil • Onivyde (nanoliposomal irinotecan)
5ms
IMMUNOREACT 11: IMMUNE PREDICTORS OF RELAPSE AFTER ADJUVANT THERAPY IN RECTAL CANCER PATIENTS (UEGW 2024)
Our preliminary data suggest that the immune-related markers signature in the healthy peritumoral mucosa might be useful for predicting relapse after adjuvant therapy in rectal cancer patients. Moreover, relapsing patients showed lower stimulation of macrophages and lymphocytes, thus suggesting that impaired immune surveillance might influence adjuvant therapy outcomes. Sampling healthy mucosa might help the decision-making about adjuvant therapy after surgery for rectal cancer.
Clinical • IO biomarker
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CD8 (cluster of differentiation 8) • CD38 (CD38 Molecule) • CTLA4 (Cytotoxic T-Lymphocyte Associated Protein 4) • VTCN1 (V-Set Domain Containing T Cell Activation Inhibitor 1) • IL2RA (Interleukin 2 receptor, alpha) • CD163 (CD163 Molecule) • CD4 (CD4 Molecule) • CD28 (CD28 Molecule) • CCL8 (C-C Motif Chemokine Ligand 8) • FOXP3 (Forkhead Box P3) • TNFSF13B (TNF Superfamily Member 13b) • IL1R1 (Interleukin 1 receptor, type I) • CD80 (CD80 Molecule) • CD86 (CD86 Molecule) • ISG20 (Interferon Stimulated Exonuclease Gene 20) • SIGLEC1 (Sialic Acid Binding Ig Like Lectin 1) • MS4A6A (Membrane Spanning 4-Domains A6A)
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CD38 expression • IL2RA expression • CD8-H
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nCounter® PanCancer IO 360™ Panel
6ms
Clinicopathological characteristics of the CD8+ T lymphocytes infiltration and its mechanism in distinct molecular subtype of medulloblastoma (PubMed, Beijing Da Xue Xue Bao Yi Xue Ban)
The CD8+T cells infiltrate more in the WNT subtype MB than other subtypes. The mechanism may be related to the activation of CXCL11-CXCR3 chemokine system, and the patients with more infiltration of CD8+T cells in tumor have better prognosis. This finding may provide the necessary clinicopathological basis for the regulatory mechanism of CD8+T cells infiltration in MB, and give a new potential therapeutic target for the future immunotherapy of MB.
Journal • IO biomarker
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CD8 (cluster of differentiation 8) • CXCL11 (C-X-C Motif Chemokine Ligand 11) • CXCR3 (C-X-C Motif Chemokine Receptor 3)
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nCounter® PanCancer IO 360™ Panel
7ms
Enhanced amphiregulin exposure promotes modulation of the high grade serous ovarian cancer tumor immune microenvironment. (PubMed, Front Pharmacol)
Finally, combinatorial treatment with an AREG neutralizing antibody and carboplatin led to a synergistic reduction of cell viability in HGSOC cell lines OVCAR8 and PEA2. Overall, this study demonstrates AREG's ability to modulate cytotoxic responses within the OTIME and highlights its role as a novel HGSOC immune target.
Journal
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EGFR (Epidermal growth factor receptor) • CD8 (cluster of differentiation 8) • CXCL8 (Chemokine (C-X-C motif) ligand 8) • STAT3 (Signal Transducer And Activator Of Transcription 3) • IL2 (Interleukin 2) • IL5 (Interleukin 5) • CXCL1 (Chemokine (C-X-C motif) ligand 1)
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nCounter® PanCancer IO 360™ Panel
|
carboplatin
7ms
GENE EXPRESSION PROFILING OF RELAPSED AND REFRACTORY PRIMARY CENTRAL NERVOUS SYSTEM LYMPHOMA REVEALS ENRICHMENT OF IMMUNE SIGNALING PATHWAYS (EHA 2024)
Induction therapy consistedof methotrexate, vincristine, procarbazine (MVP) with (40...1%) rituximab (R-MVP)... We observed a significant proportion of "high-risk" PCNSL characterized by dismal prognosis and tumorupregulation of immune checkpoints TIGIT and HAVCR2, supporting immune evasion as a disease mechanism. This represents a potential avenue for integrating immunotherapy into existing treatment regimens.
Gene expression profiling • IO biomarker
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CD8 (cluster of differentiation 8) • HAVCR2 (Hepatitis A Virus Cellular Receptor 2) • TIGIT (T Cell Immunoreceptor With Ig And ITIM Domains 2) • MVP (Major Vault Protein) • WNT11 (Wnt Family Member 11)
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nCounter® PanCancer IO 360™ Panel
|
Rituxan (rituximab) • vincristine • Matulane (procarbazine hydrochloride) • methotrexate IV
7ms
DIFFERENCES IN IMMUNE TRANSCRIPTOMIC PROFILE ARE ASSOCIATED WITH RESPONSE TO AZACITIDINE AND VENETOCLAX IN NEWLY DIAGNOSED UNFIT-FOR-CHEMOTHERAPY ACUTE MYELOID LEUKEMIA PATIENTS (EHA 2024)
With the limitation of the low number of patients analysed, this study suggests that differences in immunetranscriptomic profile are associated with response to Aza-Ven in newly diagnosed unfit-for-chemotherapyAML patients. Some specific gene expression patterns are differentially shown at diagnosis in responders ascompared to refractory patients, while interesting and still unexplored pathways and signals, such as T-cellsactivation and priming, and antigen presentation, were described in responder patients during therapy andrelated to incoming relapse. Further studies on larger cohorts of patients are highly warranted to confirm ourpreliminary findings.
Clinical • IO biomarker
|
TP53 (Tumor protein P53) • MYC (V-myc avian myelocytomatosis viral oncogene homolog) • CD8 (cluster of differentiation 8) • TIGIT (T Cell Immunoreceptor With Ig And ITIM Domains 2) • FOSL1 (FOS Like 1) • TGFB2 (Transforming Growth Factor Beta 2)
|
MYC expression • CD8 expression • TP53 expression
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nCounter® PanCancer IO 360™ Panel
|
Venclexta (venetoclax) • azacitidine
8ms
Exploratory biomarker analysis based on the PREDICT trial (AIO-PAK-0216) for response prediction to second-line nal-IRI/5-FU/FA chemotherapy (CTX) in metastatic PDAC patients (mPDAC Pts) (ESMO-GI 2024)
In this study, we have identified a favorable TiME for L-TTF (2nd line CTX) mPDAC patients showing CD8+-T cell inflamed ("hot") tumor tissues prior to 2nd line CTX. We further propose CXCR3+-CD8+ T cells as potential liquid biomarker for predicting 2nd line nal-IRI/5-FU/FA success.
Clinical • PD(L)-1 Biomarker • IO biomarker • Metastases
|
CD8 (cluster of differentiation 8) • PD-1 (Programmed cell death 1) • LAG3 (Lymphocyte Activating 3) • CTLA4 (Cytotoxic T-Lymphocyte Associated Protein 4) • TIGIT (T Cell Immunoreceptor With Ig And ITIM Domains 2) • IDO1 (Indoleamine 2,3-dioxygenase 1) • CXCL9 (Chemokine (C-X-C motif) ligand 9) • CD4 (CD4 Molecule) • CXCL13 (Chemokine (C-X-C motif) ligand 13) • CXCL11 (C-X-C Motif Chemokine Ligand 11) • CXCR3 (C-X-C Motif Chemokine Receptor 3) • CD96 (CD96 Molecule)
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nCounter® PanCancer IO 360™ Panel
|
5-fluorouracil • Onivyde (nanoliposomal irinotecan)
8ms
Prehabilitation During Neoadjuvant Chemotherapy Results In An Enhanced Tumour Immune Response In Oesophageal Cancer. (ACSM 2024)
We show that exercise training during NAC, which improves cardiorespiratory fitness, is associated with increased frequencies of TILs and maturity of TLS. These data suggest that exercise during NAC enhances the immune system possibly to be suitable for immunotherapy.
Clinical
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PD-L1 (Programmed death ligand 1) • CD8 (cluster of differentiation 8) • CD4 (CD4 Molecule) • NCAM1 (Neural cell adhesion molecule 1) • LAMP3 (Lysosomal Associated Membrane Protein 3) • CD68 (CD68 Molecule)
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nCounter® PanCancer IO 360™ Panel
8ms
Biomarker analysis and updated clinical outcomes: Neoadjuvant systemic treatment (NST) with nivolumab (nivo) and relatlimab (rela) in surgically resectable melanoma. (ASCO 2024)
To our knowledge, this is the first longitudinal RNA analysis reported from pts treated with nivo+rela. BL immune features associated with major pathologic response include higher GES of B cells, CD45+ cells, CD8 T cells, and increased expression of TIGIT, IDO and IFN-y. Additionally, higher B7-H3 in non MPR pts may indicate a clinically actionable strategy for further evaluation.
Clinical data • Clinical • Tumor mutational burden • PD(L)-1 Biomarker • IO biomarker
|
TMB (Tumor Mutational Burden) • CD8 (cluster of differentiation 8) • IFNG (Interferon, gamma) • CD276 (CD276 Molecule) • TIGIT (T Cell Immunoreceptor With Ig And ITIM Domains 2) • IDO1 (Indoleamine 2,3-dioxygenase 1) • PTPRC (Protein Tyrosine Phosphatase Receptor Type C)
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nCounter® PanCancer IO 360™ Panel
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Opdivo (nivolumab) • relatlimab (BMS-986016)
9ms
Gene Signatures predict immune-related skin adverse events in melanoma patients (EADO 2024)
Methods Gene profiling analysis was performed using NanoString IO360 panel from PBMCs of pts with cutaneous melanoma treated with antiPD1 (pembrolizumab or nivolumab) in both clinical setting (adjuvant and first line therapy). Conclusions In this retrospective study, we identify gene signatures model associated with the onset of skin toxicities related to anti-PD1 treatment in stage III/IV unresectable and resected stage III melanoma pts. Further investigations are needed in order to validate the signature in an independent dataset.
Adverse events • Clinical • PD(L)-1 Biomarker • Gene Signature • IO biomarker
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EGFR (Epidermal growth factor receptor) • ER (Estrogen receptor) • TNFRSF8 (TNF Receptor Superfamily Member 8) • HIF1A (Hypoxia inducible factor 1, alpha subunit) • CXCR3 (C-X-C Motif Chemokine Receptor 3) • ADAM12 (ADAM Metallopeptidase Domain 12) • DUSP5 (Dual Specificity Phosphatase 5) • ITGA1 (Integrin Subunit Alpha 1)
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nCounter® PanCancer IO 360™ Panel
|
Keytruda (pembrolizumab) • Opdivo (nivolumab)
10ms
Multiomics characterization of breast angiosarcoma from an Asian cohort reveals enrichment for angiogenesis signaling pathway and tumor-infiltrating macrophages (AACR 2024)
In conclusion, we observed a convergence of both mutational and expression signatures on angiogenesis signaling pathways in our AS-B cases. The spatial transciptomic data revealed that AS-B was enriched for tumor-infiltrating macrophages and T-cells which might have implications on the role of immunotherapy.
IO biomarker
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JAK2 (Janus kinase 2) • CD8 (cluster of differentiation 8) • KDR (Kinase insert domain receptor) • PTCH1 (Patched 1) • HIF1A (Hypoxia inducible factor 1, alpha subunit) • ATRX (ATRX Chromatin Remodeler) • FLT4 (Fms-related tyrosine kinase 4) • NOTCH4 (Notch 4) • EPHB1 (EPH Receptor B1) • PRKACA (Protein Kinase CAMP-Activated Catalytic Subunit Alpha) • SETD1A (SET Domain Containing 1A) • SMAD3 (SMAD Family Member 3)
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nCounter® PanCancer IO 360™ Panel
10ms
Spatial organization between claudin and the tumor microenvironment in head and neck squamous cell carcinomas (AACR 2024)
We characterized the expression of CLDN6 across the different cohorts of OSCC samples and further investigated the relationship within the tumor immune microenvironment coupled to genes related to the prognosis of OSCC. A better understanding of the TME and gene expression profiling of OSCC tumors and the effect of smoking will allow us to tailor the treatment of patients to continue to improve outcomes.
CLDN6 (Claudin 6)
|
CLDN6 expression
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nCounter® PanCancer IO 360™ Panel
10ms
Evaluation of NXI-101 in non-small cell lung cancer (NSCLC) using patient-derived organotypic tumor spheroids (PDOTS): Targeting a novel tumorigenic pathway (AACR 2024)
Significant cytotoxicity was observed in 2 out of 10 patient tumors (20%) as a monotherapy and 4 out of 10 (40%) when used in combination with atezolizumab. These data support the prospects of NXI-101 as a first-in-class therapeutic for the treatment of NSCLC when used alone or in combination with an immune checkpoint inhibitor. Moreover, the findings highlight the PDOTS platform's substantial value in capturing patient-specific tumor response variability and providing robust support for the mechanistic evaluation of cancer therapeutics.
Clinical • PD(L)-1 Biomarker • IO biomarker
|
TGFB1 (Transforming Growth Factor Beta 1)
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nCounter® PanCancer IO 360™ Panel
|
Tecentriq (atezolizumab)
10ms
Immune modulatory cancer vaccines against IDO1 and PD-L1 trigger distinct pathways and cooperatively reduce tumor growth in preclinical models (AACR 2024)
Lastly, IDO1 and PDL1-specific CD4+ T cell clones from melanoma patients treated with IO102-IO103 vaccine could selectively target cells differentially expressing IDO1 or PDL1.Our data collectively show that cells expressing IDO1 and PD-L1 represent distinct populations in the TME thus targetable by the IDO1-PD-L1 vaccination approach...These data are supported by ex vivo functional assays using target specific T cells from vaccinated patients. Altogether, our data support the use of a dual antigen approach to reduce the immunosuppression and enhance anti-tumor effect.
Preclinical • PD(L)-1 Biomarker • IO biomarker
|
PD-L1 (Programmed death ligand 1) • IFNG (Interferon, gamma) • IDO1 (Indoleamine 2,3-dioxygenase 1) • CD4 (CD4 Molecule)
|
PD-L1 expression • IDO1 expression • IFNG expression
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nCounter® PanCancer IO 360™ Panel
|
IO102-IO103
10ms
Spatial transcriptomic study of the tumor microenvironment in HNSCC (AACR 2024)
GeoMx WTA panel provided an unbiased view of 18,000 protein-coding genes at specific TME regions. These counts were successfully mapped to the 12 ROIs on the tissue. A pseudo-TIS score was generated using the same 18 gene signature from the WTA panel for each ROI.
IO biomarker
|
PTPRC (Protein Tyrosine Phosphatase Receptor Type C)
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nCounter® PanCancer IO 360™ Panel
10ms
Tumoral and systemic immune modulation with neoadjuvant (NeoAd) intratumoral (IT) TAVO-EP (plasmid IL-12 electro gene transfer) and nivolumab (NIVO) in patients (pts) with operable locoregionally advanced melanoma (AACR 2024)
At baseline, most patients exhibited low CD8+ TIL, PD-L1 and TIS, with enhanced immune activation following treatment in the TME and blood including increased immune-related gene expression, CD8+ TIL, peritumoral CD8+ T cells and TIS. Four of 5 pts with negative predictive baseline biomarkers [CD8+TIL/PD-L1/TIS]low experienced pCRs supporting activity of IL12/anti-PD1 based regimens in this setting.
Clinical • PD(L)-1 Biomarker • IO biomarker • Metastases
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PD-L1 (Programmed death ligand 1) • CD8 (cluster of differentiation 8) • IFNG (Interferon, gamma) • JAK1 (Janus Kinase 1) • IL2 (Interleukin 2)
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CD8 expression
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PD-L1 IHC 22C3 pharmDx • nCounter® PanCancer IO 360™ Panel
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Opdivo (nivolumab) • Tavo (tavokinogene telsaplasmid)
10ms
Identifying molecular mechanisms in triple negative breast cancer disparities: Unveiling the role of Hedgehog signaling in non-Hispanic Black women (AACR 2024)
IL20RA and SOX10 represent potential biomarkers for TNBC risk that may serve as a stratification tool for NHB women. The results of this study have the potential to improve assessment and management of TNBC risk among NHB women, thereby contributing significantly to reducing health disparities in breast cancer outcomes.
Clinical
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SOX10 (SRY-Box 10)
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nCounter® Breast Cancer 360™ Panel • nCounter® PanCancer IO 360™ Panel
11ms
Alterations In The Immune Microenvironment Of Endometriosis And Endometriosis Associated Ovarian Carcinoma: A Longitudinal Cohort Study (ESGO 2024)
Furthermore, the differences between the EAOC subtypes suggest distinct processes driving EC or CCC development from endometriotic lesions, with a more inflammatory signature in EC that may be promising for the development future therapeutic strategies. This study sheds light on immune dynamics in ovarian endometriosis and EAOC, offering potential avenues for future research.
TGFB1 (Transforming Growth Factor Beta 1)
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nCounter® PanCancer IO 360™ Panel
12ms
Unlocking molecular mechanisms and identifying druggable targets in matched-paired brain metastasis of breast and lung cancers. (PubMed, Front Immunol)
Validation using immunohistochemistry further supported these findings. In conclusion, the findings highlight the significance of using matched-paired samples to identify cancer lineage-specific therapies that may improve brain metastasis patients outcomes.
Journal • IO biomarker
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CD73 (5'-Nucleotidase Ecto) • VTCN1 (V-Set Domain Containing T Cell Activation Inhibitor 1) • IDO1 (Indoleamine 2,3-dioxygenase 1) • NT5E (5'-Nucleotidase Ecto) • HDAC3 (Histone Deacetylase 3)
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nCounter® PanCancer IO 360™ Panel
1year
ASTX660-01 Phase 2: A Case Study of Tolinapant-Induced Pseudoprogression in CTCL (ASH 2023)
Our data offer a cellular and molecular insight into a case of clinical pseudoprogression observed during tolinapant treatment. Understanding pseudoprogression is important for clinical investigators and patients to ensure treatment with tolinapant, or other IAP antagonists, are not discontinued prematurely.
P2 data • Clinical
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CD8 (cluster of differentiation 8) • CXCL10 (Chemokine (C-X-C motif) ligand 10) • CD4 (CD4 Molecule) • CD7 (CD7 Molecule) • GZMA (Granzyme A) • XIAP (X-Linked Inhibitor Of Apoptosis) • CXCR3 (C-X-C Motif Chemokine Receptor 3) • GZMH (Granzyme H) • PRF1 (Perforin 1) • CXCL1 (Chemokine (C-X-C motif) ligand 1) • DPP4 (Dipeptidyl Peptidase 4)
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FoundationOne® Heme CDx • nCounter® PanCancer IO 360™ Panel
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tolinapant (ASTX660)
1year
DIFFERENCES IN IMMUNE TRANSCRIPTOMIC PROFILE ARE ASSOCIATED WITH RESPONSE TO FLT3 INHIBITORS IN FLT3- MUTATED ACUTE MYELOID LEUKEMIA PATIENTS AND MAY CONTRIBUTE TO THERAPY RESISTANCE (SIE 2023)
Two cohorts of FLT3-mut AML patients treated either with Midostaurin in combination with intensive chemotherapy (M cohort) as induction or Gilteritinib (G cohort) as salvage at Seràgnoli Hematology Institute of Bologna were enrolled. Conclusions. This study portrays evolutionary trajectories under FLT3i-containing regimens pressure and highlights novel preliminary differences in immune transcriptomic profile associated with FLT3i effectiveness.
Clinical
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TP53 (Tumor protein P53) • FLT3 (Fms-related tyrosine kinase 3) • WT1 (WT1 Transcription Factor) • IL2RA (Interleukin 2 receptor, alpha) • U2AF1 (U2 Small Nuclear RNA Auxiliary Factor 1) • CXCL5 (Chemokine (C-X-C motif) ligand 5) • CD1C (CD1c Molecule)
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TP53 mutation • FLT3 mutation • U2AF1 mutation
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nCounter® PanCancer IO 360™ Panel
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Xospata (gilteritinib) • Rydapt (midostaurin)
1year
Gene expression profiles (GEPs) of immuno-oncologic pathways as predictors of response to checkpoint inhibitors in advanced NSCLC. (PubMed)
The TIS (tumor inflammation signature) and IFN-γ signatures constitute predictive biomarkers to identify patients with NSCLC patients who would possibly benefit from ICI therapies.
Checkpoint inhibition • Journal • PD(L)-1 Biomarker • Gene Expression Profile • IO biomarker • Metastases • Immuno-oncology
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nCounter® PanCancer IO 360™ Panel
1year
Adoptively Infused Memory-like Natural Killer Cells Impact Adaptive Immune Responses in Patients with Acute Myeloid Leukemia (ASH 2023)
Patients were lymphodepleted with fludarabine and cyclophosphamide...Multi-modal analyses of WU-NK-101 highlight unique transcriptional and functional states, which could underpin in vivo potency and persistence. WU-NK-101 are currently being evaluated in a phase 1 study of R/R AML (#NCT05470140).
Clinical • PARP Biomarker • IO biomarker
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CD8 (cluster of differentiation 8) • LAG3 (Lymphocyte Activating 3) • CD276 (CD276 Molecule) • HAVCR2 (Hepatitis A Virus Cellular Receptor 2) • CD34 (CD34 molecule) • PARP1 (Poly(ADP-Ribose) Polymerase 1) • NCAM1 (Neural cell adhesion molecule 1) • STING (stimulator of interferon response cGAMP interactor 1) • IL18 (Interleukin 18) • CD7 (CD7 Molecule) • IL15 (Interleukin 15) • TRB (T Cell Receptor Beta Locus)
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nCounter® PanCancer IO 360™ Panel • Oncomine™ TCR Pan-Clonality Assay
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cyclophosphamide • fludarabine IV • WU-NK-101