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GENE:

SPTA1 (Spectrin Alpha)

i
Other names: SPTA1, Spectrin Alpha, Erythrocytic 1, Spectrin Alpha Chain, Erythrocytic 1, Erythroid Alpha-Spectrin, Elliptocytosis 2, SPTA, EL2, Spectrin, Alpha, Erythrocytic 1 (Elliptocytosis 2), Spectrin Alpha Chain, Erythrocyte, Alpha-I Spectrin, SPTA1, SPH3, HPP, HS3
2ms
Comprehensive molecular profiling of urologic tumors presented in a molecular tumor board: insights from a real-world precision oncology cohort. (PubMed, Front Oncol)
Comprehensive molecular profiling in a MTB setting reveals distinct and therapeutically relevant mutational patterns across urologic cancers. These data support the integration of MTBs into clinical workflows and highlight the potential of co-mutational signatures to guide personalized treatment strategies.
Journal • Real-world evidence • Tumor mutational burden • BRCA Biomarker • PARP Biomarker
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TP53 (Tumor protein P53) • TMB (Tumor Mutational Burden) • BRCA1 (Breast cancer 1, early onset) • BRCA2 (Breast cancer 2, early onset) • PBRM1 (Polybromo 1) • KMT2D (Lysine Methyltransferase 2D) • LRP1B (LDL Receptor Related Protein 1B) • KMT2C (Lysine Methyltransferase 2C) • APC (APC Regulator Of WNT Signaling Pathway) • SETD2 (SET Domain Containing 2, Histone Lysine Methyltransferase) • PARP1 (Poly(ADP-Ribose) Polymerase 1) • SPTA1 (Spectrin Alpha) • SFTPA1 (Surfactant Protein A1)
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TP53 mutation
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TruSight Oncology 500 Assay
8ms
Genomic alteration correlates with programmed cell death ligand 1 (PD-L1) expression in 2750 Chinese non-small-cell lung cancer patients. (PubMed, Clin Transl Oncol)
This study indicates that PD-L1 expression levels are significantly associated with specific genomic alterations and clinical outcomes in patients with NSCLC. Particularly in evaluating the efficacy of ICI therapy, the combined biomarker of PD-L1 and TMB shows important clinical application value.
Journal • Tumor mutational burden • PD(L)-1 Biomarker • IO biomarker
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EGFR (Epidermal growth factor receptor) • PD-L1 (Programmed death ligand 1) • KRAS (KRAS proto-oncogene GTPase) • TP53 (Tumor protein P53) • TMB (Tumor Mutational Burden) • LRP1B (LDL Receptor Related Protein 1B) • PTPRD (Protein tyrosine phosphatase receptor type D) • SPTA1 (Spectrin Alpha) • SFTPA1 (Surfactant Protein A1)
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PD-L1 expression • TP53 mutation • EGFR mutation • TMB-H • PD-L1 overexpression • EGFR expression • PD-L1 underexpression • PD-L1 negative • TMB-L
9ms
Genes of the "regulation of lymphocyte activation" pathway may influence immune cells infiltration in growth hormone secreting pituitary tumors. (PubMed, Pituitary)
This study provides new insights into the genetic basis of the TME in somatotropinomas and suggests that genetics may influence immune cells infiltration in acromegaly.
Observational data • Retrospective data • Journal
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CD8 (cluster of differentiation 8) • CD68 (CD68 Molecule) • SPTA1 (Spectrin Alpha) • FANCD2 (FA Complementation Group D2) • SFTPA1 (Surfactant Protein A1)
9ms
Genetic insight into lung neuroendocrine tumors: Notch and Wnt signaling pathways as potential targets. (PubMed, J Transl Med)
This pilot study highlights the potential role of NGS analysis on solid biopsy in the assessment of the mutational profile of lung NET. A comparison of germline and somatic mutations is critical to identifying putative tumor driver mutations. In perspective, the enrichment of a subpopulation of cancer cells in the blood, with one or more specific mutations, is information of enormous clinical relevance, either for prognosis or therapeutic decisions. Translational studies on large prospective series are required to establish the role of liquid biopsy in lung NET.
Journal
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KDM5C (Lysine Demethylase 5C) • NOTCH4 (Notch 4) • SPTA1 (Spectrin Alpha) • SFTPA1 (Surfactant Protein A1) • TAF1 (TATA-Box Binding Protein Associated Factor 1)
1year
Longitudinal genomic profiling using liquid biopsies in metastatic nonsquamous NSCLC following first line immunotherapy. (PubMed, NPJ Precis Oncol)
STK11, SMARCA4, KRAS, SLT2, and KEAP1 mutations showed the strongest correlation with poorer overall survival, while SMARCA4, STK11, SPTA1, TBX3, and KEAP1 mutations correlated with shorter progression-free survival. Overall, longitudinal liquid biopsy profiling provided valuable insights into lung cancer biology post-immunotherapy, potentially guiding personalized therapies and future drug development.
Journal • Liquid biopsy • IO biomarker
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KRAS (KRAS proto-oncogene GTPase) • TP53 (Tumor protein P53) • STK11 (Serine/threonine kinase 11) • KEAP1 (Kelch Like ECH Associated Protein 1) • LRP1B (LDL Receptor Related Protein 1B) • SMARCA4 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily A, member 4) • KMT2C (Lysine Methyltransferase 2C) • FAT3 (FAT Atypical Cadherin 3) • SPTA1 (Spectrin Alpha) • CDH2 (Cadherin 2) • SFTPA1 (Surfactant Protein A1)
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TP53 mutation • KRAS mutation • STK11 mutation • KEAP1 mutation
1year
A Comparative Study On The Progression Of Neuroendocrine Carcinomas and Mixed Neuroendocrine-Non-Neuroendocrine Neoplasms. (PubMed, Oncology)
EP regimen remains the most effective chemotherapy option for neuroendocrine tumor patients. There were prognostic differences between NECs and MiNENs, as well as differences in genetic mutations and signaling pathways. This study provided new insights into the prognosis assessment and treatment strategies for NENs, particularly highlighting the importance of personalized treatments and the development of novel targeted therapies.
Journal
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TP53 (Tumor protein P53) • ARID1A (AT-rich interaction domain 1A) • NF1 (Neurofibromin 1) • MUC16 (Mucin 16, Cell Surface Associated) • NOTCH2 (Notch 2) • CARD11 (Caspase Recruitment Domain Family Member 11) • FAT4 (FAT Atypical Cadherin 4) • SPTA1 (Spectrin Alpha) • PDGFB (Platelet Derived Growth Factor Subunit B) • SFTPA1 (Surfactant Protein A1) • ZNRF3 (Zinc And Ring Finger 3)
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TP53 mutation • ATM mutation • ARID1A mutation • NF1 mutation • AR mutation • MUC16 mutation • NOTCH2 mutation
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cisplatin • etoposide IV
over1year
Differential prognostic impact and potential molecular mechanisms of PCDHGA12 expression in lung adenocarcinoma and squamous cell carcinoma. (PubMed, Int Immunopharmacol)
These genetic and immunological differences may account for the significant prognostic disparity of PCDHGA12 levels between LUAD and LUSC. Further experimental studies are essential to validate these associations and investigate potential targeted and immunotherapeutic strategies.
Journal • IO biomarker
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KEAP1 (Kelch Like ECH Associated Protein 1) • CD8 (cluster of differentiation 8) • HMGB1 (High Mobility Group Box 1) • SPTA1 (Spectrin Alpha) • TNFRSF18 (TNF Receptor Superfamily Member 18) • NAV3 (Neuron Navigator 3 ) • CDH23 (Cadherin Related 23) • SFTPA1 (Surfactant Protein A1)
over1year
Chondroid Chordoma with RICTOR Amplification: A Case Report (AANP 2024)
To our knowledge, this is the first report of a chordoma with RICTOR amplification, which was co-amplified with FGF10 on chromosome 5p13. RICTOR amplification may represent a clinically significant alteration in chordoma and predict response to targeted therapy with RICTOR/mTORC2 inhibitors.
Clinical • Case report • Tumor mutational burden
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TMB (Tumor Mutational Burden) • CCNE1 (Cyclin E1) • SMARCB1 (SWI/SNF Related, Matrix Associated, Actin Dependent Regulator Of Chromatin, Subfamily B, Member 1) • MDM4 (The mouse double minute 4) • POLD1 (DNA Polymerase Delta 1) • FLT4 (Fms-related tyrosine kinase 4) • RICTOR (RPTOR Independent Companion Of MTOR Complex 2) • SPTA1 (Spectrin Alpha) • FGF10 (Fibroblast Growth Factor 10) • SFTPA1 (Surfactant Protein A1)
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TruSight Oncology 500 Assay
2years
Identification of key genes in chronic intermittent hypoxia-induced lung cancer progression based on transcriptome sequencing. (PubMed, BMC Cancer)
CIH caused a significant change of gene expression profiling in LLC-bearing mice. The DEGs were found to be involved in various physiological and pathological processes and correlated with poorer prognosis in lung cancer.
Journal
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SPTA1 (Spectrin Alpha) • TGFB1 (Transforming Growth Factor Beta 1) • IL17A (Interleukin 17A) • KLRG1 (Killer Cell Lectin Like Receptor G1) • MIR186 (MicroRNA 186) • SFTPA1 (Surfactant Protein A1)
2years
Exploring the molecular features and genetic prognostic factors of pulmonary high-grade neuroendocrine carcinomas. (PubMed, Hum Pathol)
IHC for Rb was reliable for predicting LCNEC molecular subtypes, indicating its clinical value. NCOR2 and SPTA1 alterations were identified as prognostic factors that may provide therapeutic targets for patients with NEC.
Journal
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EGFR (Epidermal growth factor receptor) • TP53 (Tumor protein P53) • RB1 (RB Transcriptional Corepressor 1) • NOTCH1 (Notch 1) • KMT2D (Lysine Methyltransferase 2D) • LRP1B (LDL Receptor Related Protein 1B) • HIF1A (Hypoxia inducible factor 1, alpha subunit) • FAT3 (FAT Atypical Cadherin 3) • NCOR2 (Nuclear Receptor Corepressor 2) • SPTA1 (Spectrin Alpha) • AMPK (Protein Kinase AMP-Activated Catalytic Subunit Alpha 1) • SFTPA1 (Surfactant Protein A1)
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TP53 mutation • EGFR mutation • NOTCH1 mutation • KMT2D mutation • HIF1A expression
2years
Loss of chromosome 9p21 is associated with a poor prognosis in adenosquamous carcinoma of the pancreas. (PubMed, Precis Clin Med)
The mutation rates of ACVR2A (6.25% vs 0%), FANCA (6.25% vs 0%), RBM10 (6.25% vs 0%), and SPTA1 (8.33% vs 1.02%) were significantly higher in ASCP than in PDAC. In conclusion, we have comprehensively described the genomic landscape of the largest cohort of ASCP patients to date and highlight that 9p21 loss may be a promising prognostic biomarker for ASCP, which provides a molecular basis for prognosis prediction and new therapeutic strategies for ASCP.
Journal
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KRAS (KRAS proto-oncogene GTPase) • TP53 (Tumor protein P53) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • MTAP (Methylthioadenosine Phosphorylase) • SMAD4 (SMAD family member 4) • CDKN2B (Cyclin Dependent Kinase Inhibitor 2B) • FANCA (FA Complementation Group A) • RBM10 (RNA Binding Motif Protein 10) • FAT3 (FAT Atypical Cadherin 3) • SPTA1 (Spectrin Alpha) • ACVR2A (Activin A Receptor Type 2A) • SFTPA1 (Surfactant Protein A1)
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CDKN2A deletion • FANCA mutation • FAT3 mutation
over2years
Combinatory genomic and transcriptomic sequencing of Chinese KRAS mutant non-small cell lung cancer revealed molecular and inflammatory heterogeneity in tumor microenvironment (ESMO Asia 2023)
Conclusions Chinese KRAS mutant lung cancers are highly heterogeneous in terms of both KRAS mutations and co-altered genes and varied in inflammatory status in tumor microenvironment as well. Molecular and immune characteristics in KRASm NSCLC may influence the clinical outcome of adjuvant therapy.
KRAS (KRAS proto-oncogene GTPase) • TP53 (Tumor protein P53) • STK11 (Serine/threonine kinase 11) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • NOTCH1 (Notch 1) • KEAP1 (Kelch Like ECH Associated Protein 1) • LRP1B (LDL Receptor Related Protein 1B) • FAT1 (FAT atypical cadherin 1) • NOTCH3 (Notch Receptor 3) • ARID1B (AT-Rich Interaction Domain 1B) • ZFHX3 (Zinc Finger Homeobox 3) • SPTA1 (Spectrin Alpha) • SFTPA1 (Surfactant Protein A1)
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KRAS mutation • KRAS G12C • KRAS G12D • KRAS G12V • KRAS G12A • KRAS G12 • KRAS Q61H
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TruSight Oncology 500 Assay