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GENE:

SEMA3A (Semaphorin 3A)

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Other names: SEMA3A, Semaphorin 3A, Hsema-I, Coll-1, SEMA1, SEMAD, SemD, Sema Domain, Immunoglobulin Domain (Ig), Short Basic Domain, Secreted, (Semaphorin) 3A, Semaphorin III, Semaphorin-3A, Sema III, Semaphorin D, Semaphorin L, Collapsin 1, Hsema-III, SEMAIII, COLL1, SEMAL, HH16
Associations
19d
A targetable developmental program co-regulates angiogenesis and immune evasion in melanoma. (PubMed, Cancer Discov)
HOXD13 orchestrates 3D enhancer-promoter contacts activating VEGFA, SEMA3A, and CD73, which remodel vasculature and elevate immunosuppressive adenosine. Consistently, HOXD13-induced tumor growth is reversed by combined VEGFR and adenosine receptor (AdR) inhibition, revealing a dual pro-angiogenic and immunosuppressive HOXD13 axis with therapeutic relevance.
Journal
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CD73 (5'-Nucleotidase Ecto) • SEMA3A (Semaphorin 3A)
25d
Papain induces Mitochondria-mediated apoptosis and modulates inflammatory signaling in leukemic cells. (PubMed, Mol Biol Rep)
Papain exhibits antileukemic effects in vitro, associated with mitochondrial-mediated apoptosis, altering cell-cycle progression, suppressing Sema3A expression, and modulating inflammatory responses. These findings suggest that papain may represent a candidate for further preclinical investigation in leukemia models.
Journal • IO biomarker
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PTEN (Phosphatase and tensin homolog) • BCL2 (B-cell CLL/lymphoma 2) • AKT1 (V-akt murine thymoma viral oncogene homolog 1) • IL6 (Interleukin 6) • TNFA (Tumor Necrosis Factor-Alpha) • IL10 (Interleukin 10) • BAX (BCL2-associated X protein) • CASP3 (Caspase 3) • GPX4 (Glutathione Peroxidase 4) • ACSL4 (Acyl-CoA Synthetase Long Chain Family Member 4) • SEMA3A (Semaphorin 3A)
3ms
The Aptamer bi-(AID-1-T) Synergizes with Radiation to Inhibit Proliferation of Human Glioma Cells. (PubMed, Pharmaceutics)
Transcriptome analysis revealed that combination treatment decreased the expression of pro-proliferative and migratory genes (e.g., PDPN, CDH3), while increasing the expression of anti-migratory (RND3) and pro-apoptotic genes (e.g., XAF1, SEMA3A). Thus, combination treatment significantly reduces tumor cell proliferation and migration; however, further studies on surviving cells are needed.
Journal
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CDH3 (Cadherin 3) • XAF1 (XIAP Associated Factor 1) • SEMA3A (Semaphorin 3A)
3ms
A newly synthesized compound induces apoptosis in prostate cancer cells by targeting mitochondrial dysfunction and the TP53/BCL-2/SEMA3 pathways. (PubMed, Biochem Biophys Res Commun)
Among inflammatory cytokines, TNF-α levels increased dose-dependently (∗∗∗∗p < 0.0001), while IL-6 and IL-10 showed no significant alterations. Collectively, These findings indicate that the synthesized thiazole compound exerts selective cytotoxicity toward prostate cancer cells via mitochondria-mediated apoptosis and inflammatory signaling modulation.
Journal • IO biomarker
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TP53 (Tumor protein P53) • MYC (V-myc avian myelocytomatosis viral oncogene homolog) • BCL2 (B-cell CLL/lymphoma 2) • IL6 (Interleukin 6) • TNFA (Tumor Necrosis Factor-Alpha) • IL10 (Interleukin 10) • CASP3 (Caspase 3) • GPX4 (Glutathione Peroxidase 4) • ANXA5 (Annexin A5) • SEMA3A (Semaphorin 3A)
3ms
Synaptic and Non-Synaptic Functions of PTPRD: A Receptor Tyrosine Phosphatase at the Crossroads of Neural Circuitry and Metabolism. (PubMed, J Neurochem)
Because PTPRD functions are pathway-specific and shaped by mini-exon usage or redundancy with other family members (PTPRS/PTPRF), domain- or ligand-selective interventions represent plausible therapeutic strategies. Elucidating its full ligand repertoire, substrate landscape, and structural basis for allosteric regulation will be critical for converting this versatile receptor from a mechanistic curiosity into a tractable target for neurodevelopmental, neuropsychiatric, and metabolic disorders.
Review • Journal
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STAT3 (Signal Transducer And Activator Of Transcription 3) • PTPRD (Protein tyrosine phosphatase receptor type D) • PTPRF (Receptor-type tyrosine-protein phosphatase F) • IL1RAP (Interleukin 1 Receptor Accessory Protein) • SEMA3A (Semaphorin 3A)
3ms
Single-cell deconstruction of medulloblastoma microenvironment elucidates subtype-specific immune architectures and prognostic molecular signatures. (PubMed, Cancer Lett)
Prognostic core genes (SHH: EMILIN3, CD163; GP3/GP4: SEMA3A, TULP1) predicted survival outcomes and demonstrated diagnostic specificity. This first comprehensive TME atlas of MB subtypes elucidate mechanisms of immunosuppressive niche formation and provides actionable core targets for precision immunotherapy.
Journal
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CD8 (cluster of differentiation 8) • CD74 (CD74 Molecule) • CD163 (CD163 Molecule) • CD4 (CD4 Molecule) • STAT6 (Signal transducer and activator of transcription 6) • LRP1 (LDL Receptor Related Protein 1) • XBP1 (X-box-binding protein 1) • SHH (Sonic Hedgehog Signaling Molecule) • SEMA3A (Semaphorin 3A)
4ms
Correlation of serum Semaphorin3A, FGF-23 levels with periodontal indices and disease severity in patients with chronic periodontitis (PubMed, Shanghai Kou Qiang Yi Xue)
Serum Sema3A is decreased and FGF-23 is increased in CP patients, which is closely related to periodontal parameters and disease severity, and combination evaluation has a high value in estimating the severity of CP patients.
Journal
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IL6 (Interleukin 6) • TNFA (Tumor Necrosis Factor-Alpha) • IL17A (Interleukin 17A) • FGF23 (Fibroblast Growth Factor 23) • SEMA3A (Semaphorin 3A)
5ms
Molecular mechanisms related to bone damage in spinal tuberculosis revealed by 4D-label-free proteomics analysis. (PubMed, Front Cell Infect Microbiol)
Meanwhile, the PI3K-Atk anti-apoptotic pathway and the ECM-receptor interaction pathway were inhibited during both infections. This study explored the pathogenic mechanism of STB based on proteomics and compared its differences with E.coli bone infection, providing new insight into the treatment of STB.
Journal • IO biomarker
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TNFA (Tumor Necrosis Factor-Alpha) • THEMIS2 (Thymocyte Selection Associated Family Member 2) • TNFRSF11B (Tumor necrosis factor receptor superfamily member 11B) • SEMA3A (Semaphorin 3A)
6ms
HIC2 Suppresses Glioblastoma Progression via Transcriptional Repression of SEMA3A and Inhibition of TGF-β Signaling. (PubMed, Free Radic Biol Med)
This transcriptional repression subsequently attenuates TGF-β signaling by diminishing Smad2/3 phosphorylation, a critical regulatory node of this pathway. Collectively, our findings elucidate a previously unrecognized tumor-suppressive mechanism wherein HIC2 inhibits GBM progression through modulation of the SEMA3A-TGF-β signaling axis.
Journal
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TGFB1 (Transforming Growth Factor Beta 1) • SEMA3A (Semaphorin 3A)
6ms
Neuropilin-1 expression in primary and metastatic prostate cancer: Expression patterns and clinicopathological correlations. (PubMed, Mol Clin Oncol)
These results suggest that while NRP-1 has potential as a biomarker, its prognostic utility as a standalone factor remains limited. Further studies are warranted to validate these findings in larger cohorts and to explore the molecular mechanisms underlying NRP-1's role in PCa.
Journal
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NRP1 (Neuropilin 1) • SEMA3A (Semaphorin 3A)
6ms
Intra-articular hexagonal boron nitride-hyaluronic acid composite hydrogels rebalance cytokine profiles and enhance extracellular matrix regeneration in a rabbit osteoarthritis model. (PubMed, Inflammopharmacology)
The findings highlight the potential of hBN-HA hybrid hydrogels as a next-generation therapeutic strategy for OA, offering dual benefits of inflammation suppression and cartilage regeneration. Given their superior efficacy over HA alone, these biomaterials represent a promising translational approach that could be further explored for clinical applications in OA treatment.
Preclinical • Journal
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TNFA (Tumor Necrosis Factor-Alpha) • IL10 (Interleukin 10) • IL1B (Interleukin 1, beta) • SEMA3A (Semaphorin 3A)
7ms
Semaphorin-3A in autoimmune rheumatic diseases: immunological and pathological aspects. (PubMed, Inflammopharmacology)
Besides, Sema-3A expression is dramatically reduced by microRNA (miR)-145-5p and miR-497-5p, demonstrating the inhibitory impact of these microRNAs on the Sema-3A expression. Altogether, these findings suggest the crucial roles of Sema-3A in ARDs pathogenesis and introduce it as a promising therapeutic tool for treating these diseases.
Review • Journal
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MIR497 (MicroRNA 497) • NRP1 (Neuropilin 1) • SEMA3A (Semaphorin 3A)