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GENE:

SEC31A (SEC31 Homolog A COPII Coat Complex Component)

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Other names: SEC31A, SEC31 Homolog A COPII Coat Complex Component, ABP125, ABP130, Protein Transport Protein Sec31A, SEC31-Related Protein A, SEC31-Like Protein 1, Web1-Like Protein, KIAA0905, SEC31L1, SEC31 Homolog A COPII Coating Complex Component, Sec31 Homolog A (S. Cerevisiae), SEC31 Homolog A (S. Cerevisiae), SEC31-Like 1 (S. Cerevisiae), Yeast Sec31p Homolog, HSPC275, HSPC334, NEDSOSB
Associations
Trials
3ms
ER-to-Golgi Trafficking is a Nutrient-Sensitive Checkpoint Linking Glucose Starvation to Cell Surface Remodeling. (PubMed, bioRxiv)
Mechanistically, we show that AMPK and ULK1 signaling orchestrate this process independent of autophagy, with ULK1-mediated phosphorylation of SEC31A driving SEC24C-dependent COPII reorganization. These findings establish ER-to-Golgi trafficking as a nutrient-sensitive regulatory node that links metabolic stress to cell surface remodeling and metastatic potential.
Journal
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CDH1 (Cadherin 1) • SEC31A (SEC31 Homolog A COPII Coat Complex Component)
4ms
Alternative Promoters Drive Transcriptomic Reprogramming and Prognostic Stratification in TNBC. (PubMed, NPJ Syst Biol Appl)
Their prognostic value remained significant after adjusting for copy number alterations and transcriptomic subtypes. A 4-feature model integrating these two promoter activities with two clinical variables (Tumor size, Ki67 index) achieved an AUROC of 0.73 and improved patient risk stratification, with a Net Reclassification Improvement (NRI) of 0.40-0.48 over the clinical-only model, underscoring the potential of promoter activity as a biomarker in TNBC.
Journal
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HUWE1 (HECT UBA And WWE Domain Containing E3 Ubiquitin Protein Ligase 1) • HDAC9 (Histone Deacetylase 9) • SEC31A (SEC31 Homolog A COPII Coat Complex Component)
5ms
Cancer-associated fibroblast-derived circKLHL24 drives perineural invasion in pancreatic cancer via dual regulation of the sec31a-CXCL12 axis. (PubMed, J Exp Clin Cancer Res)
The circKLHL24/Sec31A/miR-615-5p/CXCL12 axis is critical for CAF-induced PNI in PDAC. Therefore, circKLHL24 could serve as a potential therapeutic target for PDAC.
Journal
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CXCL12 (C-X-C Motif Chemokine Ligand 12) • KLHL24 (Kelch Like Family Member 24) • MIR615 (MicroRNA 615) • SEC31A (SEC31 Homolog A COPII Coat Complex Component)
12ms
Detection of Microsatellite Instability in Endometrial Carcinoma Using a Novel Homopolymer Assay. (PubMed, Int J Surg Pathol)
Pre-analytic evaluation of the manufacturer's recommended 20% tumor content cut-off is essential to ensure valid results. The Idylla MSI assay offers several advantages over other PCR-based assays including minimal hands-on time, rapid turn-around-time, no requirement for a paired normal sample and the use of FFPE directly without an extraction step.
Journal • Microsatellite instability • MSi-H Biomarker • IO biomarker
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MSI (Microsatellite instability) • MRE11A (MRE11 homolog, double strand break repair nuclease) • ACVR2A (Activin A Receptor Type 2A) • BTBD7 (BTB Domain Containing 7) • RYR3 (Ryanodine Receptor 3) • SEC31A (SEC31 Homolog A COPII Coat Complex Component) • SULF2 (Sulfatase 2)
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MSI-H/dMMR
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Idylla™ MSI Test
over1year
ALK-positive large B-cell lymphoma: a clinicopathological and molecular characteristics analysis of seven cases. (PubMed, Pathology)
We present seven cases of ALK+ LBCL, discussing the correlation between fusion genes and ALK protein expression, and enhancing our understanding of the genetic attributes of this tumour. This study also shows the loss of 5hmC in nearly all seven ALK+ LBCL cases, independently of TET2 mutations.
Journal • IO biomarker
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ALK (Anaplastic lymphoma kinase) • NPM1 (Nucleophosmin 1) • TET2 (Tet Methylcytosine Dioxygenase 2) • KMT2D (Lysine Methyltransferase 2D) • LRP1B (LDL Receptor Related Protein 1B) • CLTC (Clathrin Heavy Chain) • CHD2 (Chromodomain Helicase DNA Binding Protein 2) • PABPC1 (Poly(A) Binding Protein Cytoplasmic 1) • SEC31A (SEC31 Homolog A COPII Coat Complex Component)
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ALK positive • ALK rearrangement • ALK fusion • TET2 mutation • NPM1-ALK fusion
over1year
Nlp-dependent ER-to-Golgi transport. (PubMed, Int J Biol Sci)
Moreover, Nlp deficient mice were prone to spontaneous B cell lymphoma, since the developments and functions of lymphocytes significantly depended on secretory proteins through ER-to-Golgi vesicle trafficking, including IL-13, IL-17 and IL-21. Thus, perturbations of Nlp altered ER-to-Golgi communication and cellular homeostasis, and might contribute to the pathogenesis of B cell lymphoma.
Review • Journal
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CTNNB1 (Catenin (cadherin-associated protein), beta 1) • STING (stimulator of interferon response cGAMP interactor 1) • IL17A (Interleukin 17A) • IL13 (Interleukin 13) • IL21 (Interleukin 21) • SEC31A (SEC31 Homolog A COPII Coat Complex Component)
over1year
Paediatric pancreatic acinar cell carcinoma with a novel SEC31A-BRAF fusion gene. (PubMed, Virchows Arch)
Notably, this is the first reported instance of a solid tumor featuring a SEC31A-BRAF gene fusion. The discovery of this novel fusion gene expands our understanding of BRAF fusion partner profiles, particularly in the context of paediatric PACC.
Journal
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BRAF (B-raf proto-oncogene) • SEC31A (SEC31 Homolog A COPII Coat Complex Component)
almost2years
Myxoid Inflammatory Myofibroblastic Sarcoma: Clinicopathologic Analysis of 25 Cases of a Distinctive Sarcoma With Deceptively Bland Morphology and Aggressive Clinical Behavior. (PubMed, Am J Surg Pathol)
The patient whose tumor harbored SEC31A::PDGFRA was treated after multiple relapses with imatinib and sunitinib therapy, with progression-free periods of 5 and 2 years, respectively. Despite its bland appearance, myxoid inflammatory myofibroblastic sarcoma harbors a significant risk for disseminated disease, particularly when it occurs in the peritoneum. Targeted therapy could be considered for patients with disseminated disease.
Journal
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KRAS (KRAS proto-oncogene GTPase) • ALK (Anaplastic lymphoma kinase) • PDGFRA (Platelet Derived Growth Factor Receptor Alpha) • TNFRSF8 (TNF Receptor Superfamily Member 8) • PDGFRB (Platelet Derived Growth Factor Receptor Beta) • JAK1 (Janus Kinase 1) • SEC31A (SEC31 Homolog A COPII Coat Complex Component)
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KRAS mutation • ALK rearrangement • KRAS G12V • TNFRSF8 expression • KRAS G12 • KRAS Q61H
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imatinib • sunitinib
almost2years
Mea6/cTAGE5 cooperates with TRAPPC12 to regulate PTN secretion and white matter development. (PubMed, iScience)
Notably, exogenous PTN supplementation ameliorated the differentiation deficits of these OPCs. Collectively, our findings indicate that the association between TRAPPC12 and MEA6 is important for cargo trafficking and white matter development.
Journal
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SEC31A (SEC31 Homolog A COPII Coat Complex Component)
over2years
LZTR1 deficiency exerts high metastatic potential by enhancing sensitivity to EMT induction and controlling KLHL12-mediated collagen secretion. (PubMed, Cell Death Dis)
The functional inhibition of KLHL12 by LZTR1 provides important evidence that LZTR1 may be a repressor of BTB-Kelch family members. These results provide clues to the mechanism of LZTR1-deficiency carcinogenesis.
Journal • Metastases
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TGFB1 (Transforming Growth Factor Beta 1) • RIT1 (Ras Like Without CAAX 1) • LZTR1 (Leucine Zipper Like Transcription Regulator 1) • SEC31A (SEC31 Homolog A COPII Coat Complex Component)
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RAS mutation
over2years
Technical Validation of the Idylla Microsatellite Instability Assay on FFPE Tissue in Colorectal Cancers (AMP Europe 2023)
The Idylla MSI Test was successfully technically validated as an adequate tool for the evaluation of the MSI status in CRC.
Microsatellite instability • MSi-H Biomarker
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MSI (Microsatellite instability) • MLH1 (MutL homolog 1) • MSH6 (MutS homolog 6) • MSH2 (MutS Homolog 2) • PMS2 (PMS1 protein homolog 2) • MRE11A (MRE11 homolog, double strand break repair nuclease) • ACVR2A (Activin A Receptor Type 2A) • BTBD7 (BTB Domain Containing 7) • RYR3 (Ryanodine Receptor 3) • SEC31A (SEC31 Homolog A COPII Coat Complex Component) • SULF2 (Sulfatase 2)
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MSI-H/dMMR • PMS2 mutation
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Idylla™ MSI Test
3years
First-line crizotinib therapy is effective for a novel SEC31A-anaplastic lymphoma kinase fusion in a patient with stage IV lung adenocarcinoma: a case report and literature reviews. (PubMed, Anticancer Drugs)
We reported a novel rare ALK fusion SEC31A: EXON20~ALK: exon20 and showed the effectiveness of crizotinib against the fusion. This study provided strong evidence for the efficacy of ALK-TKI for rare ALK fusion.
Journal • Tumor mutational burden • PD(L)-1 Biomarker • IO biomarker • Metastases
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PD-L1 (Programmed death ligand 1) • ALK (Anaplastic lymphoma kinase) • TMB (Tumor Mutational Burden) • EML4 (EMAP Like 4) • FGF19 (Fibroblast growth factor 19) • ABCB1 (ATP Binding Cassette Subfamily B Member 1) • MUTYH (MutY homolog) • DAXX (Death-domain associated protein) • SEC31A (SEC31 Homolog A COPII Coat Complex Component)
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PD-L1 expression • ALK fusion • FGF19 amplification
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Xalkori (crizotinib)