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GENE:

PNPLA3 (Patatin Like Phospholipase Domain Containing 3)

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Other names: PNPLA3, Patatin Like Phospholipase Domain Containing 3, Adiponutrin, IPLA2epsilon, C22orf20, ADPN, Patatin-Like Phospholipase Domain-Containing Protein 3, 1-Acylglycerol-3-Phosphate O-Acyltransferase PNPLA3, Calcium-Independent Phospholipase A2-Epsilon, Lysophosphatidic Acid Acyltransferase, Acylglycerol Transacylase, IPLA2-Epsilon, DJ796I17.1, FLJ22012, Patatin-Like Phospholipase Domain Containing 3, Chromosome 22 Open Reading Frame 20, Acylglycerol O-Acyltransferase, IPLA(2)Epsilon
Associations
7d
Multi-omics SMR and experimental supportive analyses decipher causal drivers hepatocellular carcinoma. (PubMed, BMC Cancer)
By integrating germline (GWAS-based) and somatic evidence, this study provides a comprehensive view of HCC pathogenesis. This integrated strategy successfully identified a core set of genes and proteins with potential causal links to HCC, elucidating their functional convergence in cancer biology. These findings offer novel molecular insights and candidate targets for precise diagnosis, prognostic assessment, and targeted therapy of HCC, laying a solid foundation for future translational research.
Journal
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TP53 (Tumor protein P53) • TERT (Telomerase Reverse Transcriptase) • CTNNB1 (Catenin (cadherin-associated protein), beta 1) • CD4 (CD4 Molecule) • LGALS1 (Galectin 1) • LY9 (Lymphocyte Antigen 9) • ST6GAL1 (ST6 Beta-Galactoside Alpha-2,6-Sialyltransferase 1) • TERC (Telomerase RNA Component) • PNPLA3 (Patatin Like Phospholipase Domain Containing 3) • SHMT1 (Serine Hydroxymethyltransferase 1)
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TP53 mutation
11d
Germline mutations and somatic mosaicism in steatotic liver diseases and related liver carcinogenesis. (PubMed, Nat Rev Gastroenterol Hepatol)
Inherited and somatic variants can influence hepatocellular carcinoma risk through direct effects on chronic liver disease progression and/or through specific cancer-promoting pathways involving telomere maintenance and WNT signalling. Although polygenic risk scores represent a promising approach for risk stratification, current implementations face important limitations that must be addressed before achieving their full clinical potential.
Review • Journal
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PNPLA3 (Patatin Like Phospholipase Domain Containing 3)
20d
Patatin-Like Phospholipase Domain Containing 3 I148M Variant Affects Hepatocellular Carcinoma Recurrence After Liver Resection. (PubMed, Liver Int)
Patients with the PNPLA3 CG/GG genotype, especially those with progressive fibrosis, have a high risk of recurrence after liver resection. PNPLA3 genotyping may help identify patients at high risk of late recurrence who require careful long-term surveillance.
Retrospective data • Journal
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PNPLA3 (Patatin Like Phospholipase Domain Containing 3)
22d
Genome-wide association study identifies three PNPLA3/SAMM50 SNPs associated with HCC development in non-viral liver disease. (PubMed, JHEP Rep)
The stepwise increase in HCC risk with higher numbers of risk alleles suggests their potential utility as biomarkers to identify high-risk individuals without a history of chronic hepatitis B or C virus infection. These findings provide a foundation for genetic risk stratification and precision prevention strategies in populations where non-viral etiologies of HCC are becoming increasingly important.
Journal
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PNPLA3 (Patatin Like Phospholipase Domain Containing 3)
26d
The Emerging Challenge of Non-Cirrhotic MASLD-Related Hepatocellular Carcinoma: Etiology, Immunopathology, and Precision Oncology. (PubMed, Liver Cancer)
Non-cirrhotic MASLD-HCC is a distinct oncogenic entity driven by metabolic-immune interplay. Its recognition necessitates a shift in clinical paradigm: (1) surveillance strategies must incorporate metabolic and genetic risk factors beyond cirrhosis; (2) the unique TME may predict immunotherapy efficacy, urging etiology-specific trial design; and (3) a precision oncology framework integrating molecular subtyping and biomarker profiling is essential for early detection and tailored management of this growing patient population.
Review • Journal • IO biomarker
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CD8 (cluster of differentiation 8) • PNPLA3 (Patatin Like Phospholipase Domain Containing 3)
1m
A Single-Ascending and Repeated Dose Study of LY3849891 in Participants With Metabolic Dysfunction-Associated Steatotic Liver Disease (MASLD) (clinicaltrials.gov)
P1, N=176, Active, not recruiting, Eli Lilly and Company | Trial completion date: Oct 2026 --> May 2026 | Trial primary completion date: Oct 2026 --> May 2026 | Recruiting --> Active, not recruiting
Enrollment closed • Trial completion date • Trial primary completion date
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PNPLA3 (Patatin Like Phospholipase Domain Containing 3)
1m
PNPLA3 Genotype and Clinical Factors Impact Hepatocellular Carcinoma Risk: Findings From a Prospective Cohort Study. (PubMed, Aliment Pharmacol Ther)
The frequency of rs738409-G alleles was associated with a dose-dependent increase in HCC risk and was independent of other clinical risk factors. Among participants who were male, overweight, and those with diabetes, the risk of HCC was further elevated among those with rs738409-G alleles. These data may be helpful for the development of future risk stratification strategies.
Journal
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PNPLA3 (Patatin Like Phospholipase Domain Containing 3)
1m
The African Middle East Association of Gastroenterology (AMAGE) clinical practice guidelines for the diagnosis and management of metabolic dysfunction associated fatty liver disease. (PubMed, Ann Hepatol)
These guidelines are intended for routine clinical use, with a specific focus on particular groups when needed. Abbreviations: ALD, Alcoholic liver disease; ALT, Alanine aminotransferase; AMAGE, African Middle East Association of Gastroenterology; AST, Aspartate transaminase; AUC, Area under the curve; BMI, Body mass index; CAP, Controlled attenuation parameter; CKD, Chronic kidney disease; CRN, Clinical Research Network; CSPH, Clinically significant portal hypertension; CT, Computed tomography; CVD, Cardiovascular diseases; DALY, Disability-adjusted life years; EGD, Esophagogastroduodenoscopy; EUS-PPG, Endoscopic ultrasound-derived portal pressure gradient; FIB-4, Fibrosis-4 Index; FLI, Fatty liver index; FLIP, Fatty Liver Inhibition of Progression; GCKR, Glucokinase regulator gene; GRADE, Grading of Recommendation, Assessment, Development, and Evaluation; HCC, Hepatocellular carcinoma; HDL, High-density lipoprotein; HOMA-IR, Homeostasis model assessment of insulin resistance; hsCRP, High-sensitivity C-reactive protein; HSD17B13, Hydroxysteroid 17-beta dehydrogenase 13; HSI, Hepatic steatosis index; HVPG, Hepatic venous pressure gradient; LSM, Liver stiffness measurement; MAFLD, Metabolic dysfunction-associated fatty liver disease; MASH, Metabolic dysfunction-associated steatohepatitis; MBOAT7, Membrane-bound O-acyltransferase domain-containing 7; MENA, Middle East and North Africa; MRE, Magnetic resonance elastography; MRI, Magnetic resonance imaging; MRI-PDFF, Magnetic resonance imaging-proton density fat fraction; MRS, Magnetic resonance spectroscopy; NAFLD, Non-alcoholic fatty liver disease; NAS, NAFLD activity score; NITs, Non-invasive tests; PH, Portal hypertension; PNPLA3, Patatin-like phospholipase domain-containing 3; SAF, Steatosis, activity, fibrosis (score); SSM, Spleen stiffness measurement; T2DM, Type 2 diabetes mellitus; TM6SF2, Transmembrane 6 superfamily member 2; VCTE, Vibration-controlled transient elastography.
Clinical guideline • Journal
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CRP (C-reactive protein) • PNPLA3 (Patatin Like Phospholipase Domain Containing 3)
2ms
Identification of Circulating MiR-4651 as Novel Biomarker for Metabolic Dysfunction-Associated Steatotic Liver Disease. (PubMed, Gastro Hep Adv)
The PNPLA3 p.I148M genotype was not associated with altered levels of microRNAs. Serum microRNAs, in particular miR-4651, may serve as additional biomarkers in patients with steatotic liver disease.
Journal
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MIR21 (MicroRNA 21) • MIR335 (MicroRNA 335) • MIR122 (MicroRNA 122) • MIR146B (MicroRNA 146b) • MIR433 (MicroRNA 433) • PNPLA3 (Patatin Like Phospholipase Domain Containing 3)
2ms
YAP/TEAD-activated TAG synthesis and peroxidation in lipid droplets confer ROS resistance in cancer stem cells. (PubMed, Redox Biol)
We demonstrate that TAG in peri-mitochondrial LDs functions as a ROS scavenger, enabling CSCs to survive in hyperoxidative environments. Targeting the signaling pathways involved in TAG synthesis presents a potential strategy for eradicating CSCs.
Journal
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PNPLA3 (Patatin Like Phospholipase Domain Containing 3) • ACSL1 (Acyl-CoA Synthetase Long Chain Family Member 1)
3ms
Genetic predeterminants and recent advancements in steatotic liver disease: A roadmap toward precision hepatology. (PubMed, World J Hepatol)
With a better understanding of the genetic factors involved in the pathogenesis of SLD, significant advancements have been made in diagnostics and therapeutics. This review explores the role of genetic factors in the disease's development, discusses current advancements in non-invasive diagnostic modalities, and examines therapeutic improvements based on these genetic insights to achieve better outcomes.
Review • Journal
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PNPLA3 (Patatin Like Phospholipase Domain Containing 3)
3ms
The impact of asparaginase phenotype-related single nucleotide polymorphisms on prognosis in pediatric B-cell precursor acute lymphoblastic leukemia. (PubMed, Eur J Med Res)
These findings underscore the importance of asparaginase phenotype-related SNP, ADSL (793-49A > C), in personalized treatment strategies based on genetic profiling and clinical parameters, potentially enhancing therapeutic efficacy and patient outcomes in pediatric BCP-ALL.
Retrospective data • Journal
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NF1 (Neurofibromin 1) • PNPLA3 (Patatin Like Phospholipase Domain Containing 3) • SOD2 (Superoxide Dismutase 2)