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BIOMARKER:

NRAS Q61L

i
Other names: NRAS1, HRAS1, N-Ras Protein Part 4, Neuroblastoma RAS Viral (V-Ras) Oncogene Homolog, NRAS, Neuroblastoma RAS Viral Oncogene Homolog, NRAS Proto-Oncogene, GTPase
Entrez ID:
Related biomarkers:
8ms
Different oncogenes and reproductive histories shape the progression of distinct premalignant clones in multistage mouse breast cancer models. (PubMed, Am J Pathol)
However, parity decreased the overall prevalence of tumors bearing Krasmut, and the magnitude of this decrease depended on both the number and timing of pregnancies. These multistage models may be useful for elucidating biological features of premalignant mammary neoplasia.
Preclinical • Journal
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KRAS (KRAS proto-oncogene GTPase) • NRAS (Neuroblastoma RAS viral oncogene homolog) • MYC (V-myc avian myelocytomatosis viral oncogene homolog) • RAS (Rat Sarcoma Virus)
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KRAS mutation • NRAS mutation • PIK3CA H1047R • RAS mutation • HRAS mutation • NRAS Q61 • MYC expression • NRAS Q61L • KRAS Q61L
10ms
Antigen presentation deficiency, mesenchymal differentiation, and resistance to immunotherapy in the murine syngeneic CT2A tumor model. (PubMed, Front Immunol)
Additionally, CT2A-luc demonstrated substantial baseline secretion of the CCL-2, CCL-5, and CCL-22 chemokines, which play important roles as myeloid chemoattractants. Although the clinical contexts that can be modeled by GL261 and CT2A for huGBM are limited, CT2A may be an informative model of immunotherapy resistance due to its deficits in antigen presentation machinery and interferon response pathways.
Preclinical • Journal • IO biomarker
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KRAS (KRAS proto-oncogene GTPase) • NRAS (Neuroblastoma RAS viral oncogene homolog) • IFNG (Interferon, gamma) • CCL2 (Chemokine (C-C motif) ligand 2) • TAP1 (Transporter 1) • PSMB8 (Proteasome 20S Subunit Beta 8)
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KRAS mutation • KRAS G12C • RAS mutation • KRAS G12 • NRAS Q61 • NRAS G12 • NRAS Q61L • KRAS Q61L
1year
RASMULTI(ON) Inhibitor RMC-7977 Targets Oncogenic RAS Mutations and Overcomes RAS/MAPK-Mediated Resistance to FLT3 Inhibitors in AML Models (ASH 2023)
RMC-7977 is a potent, oral small molecule inhibitor of both wild-type and mutant GTP-bound RAS oncoproteins (RASMULTI) and is a preclinical tool compound representative of the clinical candidate RMC-6236, currently in clinical evaluation (NCT05379985)...Gilteritinib and the gilteritinib/venetoclax combination selected for survival of cells harboring NRAS mutations, but RMC-7977 inhibited outgrowth of all cell populations...In vivo studies investigating the tolerability and activity of RMC-7977 and RMC-7977 combinations in RAS mutant/FLT3i-resistant patient-derived xenograft models are ongoing and will be presented. Collectively, our data provide preclinical evidence that combination therapies leveraging RASMULTI(ON) inhibition are effective in suppressing RAS-mutant AML clones, a common mechanism of resistance to currently approved targeted therapies in AML and a current area of high unmet clinical need.
IO biomarker
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KRAS (KRAS proto-oncogene GTPase) • FLT3 (Fms-related tyrosine kinase 3) • NRAS (Neuroblastoma RAS viral oncogene homolog) • KIT (KIT proto-oncogene, receptor tyrosine kinase) • IDH1 (Isocitrate dehydrogenase (NADP(+)) 1) • IDH2 (Isocitrate Dehydrogenase (NADP(+)) 2) • CASP3 (Caspase 3) • CASP7 (Caspase 7)
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KRAS mutation • NRAS mutation • FLT3-ITD mutation • FLT3 mutation • KIT mutation • KRAS G13D • RAS mutation • NRAS Q61K • NRAS Q61 • KIT N822K • NRAS G12 • NRAS G13 • NRAS Q61L • NRAS G13D • NRAS G12C
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Venclexta (venetoclax) • Xospata (gilteritinib) • RMC-6236 • RMC-7977
1year
Genomic subtypes of cutaneous melanoma have distinct metabolic profiles: A single-cell transcriptomic analysis. (PubMed, Arch Dermatol Res)
Primary limitations include the total quantity of single cells and breadth of available genomic subtypes plus inherent noisiness of the applied methodologies. Nonetheless, these findings nominate novel, testable therapeutic targets.
Journal
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BRAF (B-raf proto-oncogene) • NRAS (Neuroblastoma RAS viral oncogene homolog)
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BRAF V600E • BRAF V600 • BRAF wild-type • RAS wild-type • NRAS Q61 • NRAS wild-type • NRAS Q61L
1year
Confirmation of canine acanthomatous ameloblastoma using RAS Q61R immunohistochemical staining of formalin-fixed paraffin-embedded tissues. (PubMed, Front Vet Sci)
We found that all 23 CAAs showed diffuse and strong membranous RAS Q61R immunoreactivity (100% sensitivity), while none of the 8 OSCCs showed immunoreactivity (100% specificity). The data supports the use of RAS Q61R-specific rabbit monoclonal antibody for diagnostic IHC confirmation of CAA and ruling out OSCC in dogs.
Journal
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BRAF (B-raf proto-oncogene) • HRAS (Harvey rat sarcoma viral oncogene homolog)
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BRAF mutation • HRAS mutation • NRAS Q61R • NRAS Q61L • HRAS Q61L • BRAF V595E • HRAS Q61R
1year
The Expanding Role of Next Generation Sequencing in Distinguishing De-differentiated Melanoma from Pleomorphic Dermal Sarcoma (ASDP 2023)
Even focal expression of a melanocytic marker should cast doubt on a diagnosis of PDS and raise the possibility of de-differentiated melanoma, since therapy and outcomes are significantly different. Poster type: Poster Defense
Next-generation sequencing
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BRAF (B-raf proto-oncogene) • TP53 (Tumor protein P53) • NRAS (Neuroblastoma RAS viral oncogene homolog) • TERT (Telomerase Reverse Transcriptase) • SOX10 (SRY-Box 10) • PRAME (Preferentially Expressed Antigen In Melanoma) • CD31 (Platelet and endothelial cell adhesion molecule 1) • MLANA (Melan-A) • TP63 (Tumor protein 63) • PECAM1 (Platelet And Endothelial Cell Adhesion Molecule 1)
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TP53 mutation • BRAF V600E • NRAS mutation • NRAS Q61 • NRAS Q61R • NRAS Q61L • PRAME expression
1year
A Study of a Personalized Cancer Vaccine Targeting Shared Neoantigens (clinicaltrials.gov)
P1/2, N=39, Completed, Gritstone bio, Inc. | Active, not recruiting --> Completed | Trial completion date: Dec 2023 --> Mar 2023 | Trial primary completion date: Dec 2023 --> Mar 2023
Trial completion • Trial completion date • Trial primary completion date • Combination therapy • Checkpoint inhibition • IO biomarker • Checkpoint block • Metastases
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KRAS (KRAS proto-oncogene GTPase)
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KRAS G12C • KRAS G12D • KRAS G13D • KRAS G12 • NRAS Q61 • NRAS Q61R • NRAS G12 • NRAS Q61L • NRAS G13D • CTNNB1 S45P • NRAS G12V • KRAS expression • NRAS G12C
|
Opdivo (nivolumab) • Yervoy (ipilimumab) • SLATE-KRAS
1year
The OSUMMER lines: A series of ultraviolet-accelerated NRAS-mutant mouse melanoma cell lines syngeneic to C57BL/6. (PubMed, Pigment Cell Melanoma Res)
Each OSUMMER cell line possesses distinct in vitro growth properties, trametinib sensitivity, mutational signatures, and predicted antigenicity. Analysis of OSUMMER allografts shows a correlation between strong, predicted antigenicity and poor tumor outgrowth. These data suggest that the OSUMMER lines will be a valuable tool for modeling the heterogeneous responses of human melanomas to targeted and immune-based therapies.
Preclinical • Journal • IO biomarker
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NRAS (Neuroblastoma RAS viral oncogene homolog)
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NRAS mutation • NRAS Q61K • NRAS Q61 • NRAS Q61R • NRAS Q61L
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Mekinist (trametinib)
over1year
NASAL SEPTUM DEVIATION DUE TO NASAL MELANOMA: A CASE REPORT (CHEST 2023)
Regimen was switched to oral Binimetinib 45 mg daily for advanced NRAS mutant melanoma...Immune checkpoint inhibitors Pembrolizumab, Ipilimumab and Nivolumab are the most common immunotherapeutic agents used for mucosal melanomas. More recently Talimogene Laherparepvec (T-VEC) intra-lesional therapy is used to invoke local immune response which has promising results. Rapid progression of mucosal melanomas require early detection and intervention to prevent metastasis and recurrence however overall survival rate is not affected.
Clinical • PD(L)-1 Biomarker • IO biomarker
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BRAF (B-raf proto-oncogene) • NRAS (Neuroblastoma RAS viral oncogene homolog) • KIT (KIT proto-oncogene, receptor tyrosine kinase)
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NRAS mutation • KIT mutation • NRAS Q61 • NRAS Q61L
|
Keytruda (pembrolizumab) • Opdivo (nivolumab) • Yervoy (ipilimumab) • Mektovi (binimetinib) • Imlygic (talimogene laherparepvec)
over1year
Long progression free survival in patients on trametinib treatment as 2rd or 3rd line therapy (EADO 2023)
NRAS mutated melanoma has been shown to respond to treatment with the MEK-inhibitor binimetinib, however the PFS of 2,8 months and the median OS of 11 months was not promising [1]. Three patients with high tumor load all benefitted from treatment with trametinib and showed a explicitly longer PFS than the published data. After progression on ICB we therefore recommend to consider MEK-inhibition for NRAS mutated melanoma in selected cases.
Clinical • PD(L)-1 Biomarker • IO biomarker
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BRAF (B-raf proto-oncogene) • NRAS (Neuroblastoma RAS viral oncogene homolog)
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BRAF mutation • NRAS mutation • LDH elevation • BRAF wild-type • NRAS Q61 • NRAS wild-type • NRAS Q61R • NRAS Q61L
|
Mekinist (trametinib) • Mektovi (binimetinib)
over1year
DETECTION: Circulating Tumour DNA guidEd Therapy for Stage IIB/C mElanoma After surgiCal resecTION (clinicaltrials.gov)
P2/3, N=8, Terminated, The Christie NHS Foundation Trust | N=1050 --> 8 | Trial completion date: Oct 2030 --> Jan 2023 | Recruiting --> Terminated | Trial primary completion date: Oct 2030 --> Jan 2023; Closed earlier than expected due to the need for a redesign to reflect the recent change in standard of care guidelines. New design will include these treatments.
Enrollment change • Trial completion date • Trial termination • Trial primary completion date • Circulating tumor DNA
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BRAF (B-raf proto-oncogene) • NRAS (Neuroblastoma RAS viral oncogene homolog)
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BRAF V600E • BRAF V600 • BRAF V600K • NRAS Q61K • NRAS Q61 • NRAS Q61R • NRAS G12D • NRAS G12 • NRAS Q61L • BRAF V600R
|
Opdivo (nivolumab)
over1year
RAS gene mutations and histomorphometric measurements in oral squamous cell carcinoma. (PubMed, Biotech Histochem)
Our findings suggest that KRAS may be mutated more frequently in OSCC compared to HRAS and NRAS. Also, the histological features of nuclear and cellular diameter differed significantly between the KRAS mutated and unmutated cases.
Journal
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KRAS (KRAS proto-oncogene GTPase) • NRAS (Neuroblastoma RAS viral oncogene homolog) • HRAS (Harvey rat sarcoma viral oncogene homolog) • RAS (Rat Sarcoma Virus)
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KRAS mutation • RAS mutation • HRAS mutation • NRAS Q61 • KRAS G12S • KRAS Q61H • NRAS G12 • NRAS Q61L • HRAS Q61L • HRAS G12S • KRAS Q61L • NRAS G12S
over1year
Biomarkers of acquired resistance to sotorasib (soto) plus panitumumab (pani) in chemorefractory KRAS G12C-mutated metastatic colorectal cancer (mCRC) (AACR 2023)
"Of 21 pts with paired plasma samples, 17 (81%) had ≥1 acquired genomic alteration. RTK alterations and secondary (2°) RAS alterations were most common; each occurred in 57% of pts (Table). KRAS amplification was the most common single alteration (43%)."
Preclinical
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HER-2 (Human epidermal growth factor receptor 2) • KRAS (KRAS proto-oncogene GTPase) • BRAF (B-raf proto-oncogene) • NRAS (Neuroblastoma RAS viral oncogene homolog)
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BRAF V600E • KRAS mutation • EGFR mutation • KRAS G12C • BRAF V600 • EGFR amplification • RAS mutation • NRAS Q61K • HER-2 S310F • KRAS G12 • NRAS Q61 • NRAS Q61R • KRAS Q61H • KRAS amplification • NRAS Q61L • EGFR G465R • EGFR S464L • KRAS Q61L
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Guardant360® CDx
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Vectibix (panitumumab) • Lumakras (sotorasib)
over1year
Antigen presentation deficiency and mesenchymal differentiation underlie resistance to immunotherapy in the murine syngeneic CT2A tumor model (AACR 2023)
Additionally, CT2A-luc demonstrated substantial baseline secretion of the CCL-2, CCL-5, and CCL-22 chemokines, all of which are known to play important roles as myeloid chemoattractants, in marked contrast to GL261-luc2.The defect in MHC class I expression could be overcome in CT2A-luc by interferon-γ treatment, which may underlie the modest efficacy of some immunotherapy combinations for CT2A-luc. Thus, CT2A-luc may be an informative preclinical model of immunotherapy resistance due to its mesenchymal differentiation and antigen presentation machinery deficits.
Preclinical • IO biomarker
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KRAS (KRAS proto-oncogene GTPase) • NRAS (Neuroblastoma RAS viral oncogene homolog) • IFNG (Interferon, gamma) • PTPN11 (Protein Tyrosine Phosphatase Non-Receptor Type 11) • STAT3 (Signal Transducer And Activator Of Transcription 3) • CCL2 (Chemokine (C-C motif) ligand 2) • STAT6 (Signal transducer and activator of transcription 6) • STAT2 (Signal transducer and activator of transcription 2) • TAP1 (Transporter 1) • PSMB8 (Proteasome 20S Subunit Beta 8)
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KRAS mutation • KRAS G12C • RAS mutation • KRAS G12 • NRAS Q61 • NRAS G12 • NRAS Q61L • KRAS Q61L
over1year
Detecting and intervening on rare pre-existing resistant subclones to BRAF/MEK inhibitors in metastatic melanoma (AACR 2023)
We therefore anticipate mechanistic analyses of how %VAF and drug timing can optimize counter-resistance therapies. Overall, our interim data suggest a significant percentage of metastatic BRAF-mutated melanoma patients may harbor pre-existing resistant subclones, and that early treatment with counter-resistance therapy can potentially delay resistance to targeted therapy.
Metastases
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KRAS (KRAS proto-oncogene GTPase) • PIK3CA (Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) • NRAS (Neuroblastoma RAS viral oncogene homolog)
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KRAS mutation • BRAF mutation • PIK3CA mutation • PIK3CA H1047R • KRAS G12 • NRAS Q61 • NRAS Q61R • KRAS G13 • NRAS G12 • NRAS G13 • NRAS Q61L • KRAS Q61L
almost2years
A Study of a Personalized Cancer Vaccine Targeting Shared Neoantigens (clinicaltrials.gov)
P1/2, N=39, Active, not recruiting, Gritstone bio, Inc. | Recruiting --> Active, not recruiting | N=144 --> 39
Enrollment closed • Enrollment change • Combination therapy • Checkpoint inhibition • IO biomarker • Checkpoint block • Metastases
|
KRAS (KRAS proto-oncogene GTPase)
|
KRAS G12C • KRAS G12D • KRAS G13D • KRAS G12 • NRAS Q61 • NRAS Q61R • NRAS G12 • NRAS Q61L • NRAS G13D • CTNNB1 S45P • NRAS G12V • KRAS expression • NRAS G12C
|
Opdivo (nivolumab) • Yervoy (ipilimumab) • SLATE-KRAS
almost2years
A Study of a Personalized Cancer Vaccine Targeting Shared Neoantigens (clinicaltrials.gov)
P1/2, N=144, Recruiting, Gritstone bio, Inc. | Trial primary completion date: Dec 2022 --> Dec 2023
Trial primary completion date • Combination therapy • Checkpoint inhibition • IO biomarker • Checkpoint block • Metastases
|
KRAS (KRAS proto-oncogene GTPase)
|
KRAS G12C • KRAS G12D • KRAS G13D • KRAS G12 • NRAS Q61 • NRAS Q61R • NRAS G12 • NRAS Q61L • NRAS G13D • CTNNB1 S45P • NRAS G12V • KRAS expression • NRAS G12C
|
Opdivo (nivolumab) • Yervoy (ipilimumab) • SLATE-KRAS
almost2years
Acute Myeloid Leukemia with CEBPA Mutation: Next-Generation Sequencing-Based Computational Approach For Enhancing the Diagnosis of Patients with Potential Germline CEBPA Mutated Predisposition (USCAP 2023)
Recognizing and referring patients with possible germline mutations for appropriate genetic evaluation and testing provides insight into best patient care strategies along with education and testing opportunities for family members. Leukemia based NGS panels may aid as screening tools for detecting potential pathogenic germline variants.
Clinical • Next-generation sequencing
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FLT3 (Fms-related tyrosine kinase 3) • NRAS (Neuroblastoma RAS viral oncogene homolog) • IDH1 (Isocitrate dehydrogenase (NADP(+)) 1) • IDH2 (Isocitrate Dehydrogenase (NADP(+)) 2) • NPM1 (Nucleophosmin 1) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • DNMT3A (DNA methyltransferase 1) • RUNX1 (RUNX Family Transcription Factor 1) • ASXL1 (ASXL Transcriptional Regulator 1) • PTPN11 (Protein Tyrosine Phosphatase Non-Receptor Type 11) • CDKN2B (Cyclin Dependent Kinase Inhibitor 2B) • KMT2C (Lysine Methyltransferase 2C) • WT1 (WT1 Transcription Factor) • BCOR (BCL6 Corepressor) • CEBPA (CCAAT Enhancer Binding Protein Alpha) • CD36 (thrombospondin receptor) • MSH3 (MutS Homolog 3) • GATA2 (GATA Binding Protein 2) • PHF6 (PHD Finger Protein 6) • BCORL1 (BCL6 Corepressor Like 1)
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NRAS Q61 • CEBPA mutation • NRAS G13 • NRAS Q61L • DNMT3A R882H • IDH1 R132 • NRAS G13D • NRAS G13R • IDH2 R140Q • DNMT3A R882 • NPM1 W288
|
FoundationOne® Heme CDx
almost2years
Clinical Significance of Somatic Mutations in RAS/RAF/MAPK Signaling Pathway in Moroccan and North African Colorectal Cancer Patients. (PubMed, Asian Pac J Cancer Prev)
RAS mutations could be useful in future target anti-EGFR therapy and molecular CRC screening strategy in Morocco.
Journal
|
KRAS (KRAS proto-oncogene GTPase) • BRAF (B-raf proto-oncogene) • NRAS (Neuroblastoma RAS viral oncogene homolog)
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KRAS mutation • BRAF mutation • NRAS mutation • KRAS G12D • KRAS G12V • KRAS wild-type • RAS mutation • NRAS Q61 • KRAS G12S • NRAS Q61R • KRAS Q61H • KRAS exon 2 mutation • NRAS G12D • NRAS G13 • NRAS Q61L • KRAS G13A • KRAS Q61L • NRAS G12S
2years
Prevalence and patterns of mutations in RAS/RAF/MEK/ERK/MAPK signaling pathway in colorectal cancer in North Africa. (PubMed, BMC Cancer)
KRAS mutated CRC patients in North Africa have been identified with incidence closer to the European figures. Beside established anti-CRC treatment, better understanding of the causality of CRC can be established by combining epidemiology and genetic/epigenetic on CRC etiology. This approach may be able to significantly reduce the burden of CRC in North Africa.
Review • Journal
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KRAS (KRAS proto-oncogene GTPase) • BRAF (B-raf proto-oncogene) • NRAS (Neuroblastoma RAS viral oncogene homolog)
|
KRAS mutation • KRAS G12C • BRAF mutation • NRAS mutation • KRAS G12D • KRAS G12V • RAS mutation • KRAS G12A • KRAS G12 • NRAS Q61 • KRAS G12S • KRAS exon 2 mutation • NRAS G12D • NRAS G13 • NRAS Q61L • KRAS A59T • KRAS A146T • NRAS A146T • NRAS G13R • KRAS A146V • KRAS G13C • KRAS exon 3 mutation • KRAS exon 4 mutation • NRAS A146 • NRAS A59 • KRAS Q61L • NRAS G12S • KRAS A146P
2years
Idylla BRAF and NRAS (AMP 2022)
"The 23 common mutations detected in the BRAF and NRAS genes using this assay have significant impact on therapeutic selection. Somatic variants in the BRAF gene have been found in 37%-50% of all malignant melanomas, whereas somatic variants in the NRAS gene are found in 13%-25% of all melanomas. The Biocartis Idylla system offers a simple and rapid method to obtain somatic mutation information in these two genes that are of clinical importance."
EGFR (Epidermal growth factor receptor) • BRAF (B-raf proto-oncogene) • NRAS (Neuroblastoma RAS viral oncogene homolog)
|
EGFR mutation • NRAS mutation • BRAF V600 • NRAS Q61K • NRAS Q61 • NRAS Q61R • NRAS G13 • NRAS Q61L • EGFR S492R
|
Idylla™ BRAF Mutation Test • Idylla™ EGFR Mutation Test • Idylla™ NRAS-BRAF-EGFR S492R Mutation Assay
2years
HRAS Alteration Is Retained in the Heterogeneous Components of the Non-Invasive Upper Tract Urothelial Carcinoma (AMP 2022)
HRAS mutation, a well-known genetic alteration of low-grade tumor in bladder cancer, was detected only in the high-grade UTUC in the public data, suggesting a rather distinct molecular alteration of UTUC. Also, HRAS alteration was clonally retained in not only the low-grade but also the high-grade components, and was significantly correlated to intratumoral heterogeneity. Our findings can help understand the underlying biology of NI-UTUC cases with HRAS alteration and intratumoral heterogeneity.
HRAS (Harvey rat sarcoma viral oncogene homolog)
|
HRAS mutation • NRAS Q61R • NRAS Q61L • HRAS Q61L • HRAS Q61R
2years
Post-Therapy Samples Collected through Rapid Tissue Donation Confirms the Necessity of Tissue-Based NextGeneration Sequencing in Identifying Driver Mutations (AMP 2022)
These patients received various therapies including pembrolizumab, nivolumab, capmatinib, bevacizumab, osimertinib, brigatinib, erlotinib, and alectinib, as well as sotorasib. Collection and sequencing of RTD samples provides an opportunity to detect resistance mutations and to understand more about post-treatment disease progression and tumor heterogeneity. The identification of drivers by comprehensive NGS tissue testing in two cases serves as a reminder about the value of such testing when no drivers are identified by small panels or blood-based NGS testing.
Next-generation sequencing • PD(L)-1 Biomarker
|
EGFR (Epidermal growth factor receptor) • KRAS (KRAS proto-oncogene GTPase) • BRAF (B-raf proto-oncogene) • ALK (Anaplastic lymphoma kinase) • PIK3CA (Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) • MET (MET proto-oncogene, receptor tyrosine kinase) • NRAS (Neuroblastoma RAS viral oncogene homolog) • EML4 (EMAP Like 4) • CTNNB1 (Catenin (cadherin-associated protein), beta 1) • AGK (Acylglycerol Kinase)
|
KRAS mutation • EGFR mutation • KRAS G12C • BRAF mutation • PIK3CA mutation • EGFR exon 20 insertion • KRAS G12V • MET exon 14 mutation • EML4-ALK fusion • ALK fusion • MET mutation • KRAS G12 • NRAS Q61 • BRAF fusion • EGFR exon 20 mutation • AGK-BRAF fusion • NRAS Q61L • EGFR mutation + PIK3CA mutation • KRAS Q61L
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Keytruda (pembrolizumab) • Opdivo (nivolumab) • Avastin (bevacizumab) • Tagrisso (osimertinib) • erlotinib • Alecensa (alectinib) • Lumakras (sotorasib) • Alunbrig (brigatinib) • Tabrecta (capmatinib)
2years
Utility of Molecular Testing for Subtyping of New Precursor B-Cell Neoplasm Entities (WHO-HAEM5 Classification, 2022): A Single Center Experience (AMP 2022)
Clinical molecular testing in our cohort revealed these gene alterations mainly in pediatric patients and enabled diagnosis, prognosis, and risk stratification allowing the use of clinically actionable therapeutic targets in some cases. It also contributed toward a useful data set for further analysis and potential for novel drug development. Longer-term followup incorporating therapy and outcomes information would be valuable.
Clinical
|
KRAS (KRAS proto-oncogene GTPase) • FLT3 (Fms-related tyrosine kinase 3) • ABL1 (ABL proto-oncogene 1) • NRAS (Neuroblastoma RAS viral oncogene homolog) • RUNX1 (RUNX Family Transcription Factor 1) • ETV6 (ETS Variant Transcription Factor 6) • PTPN11 (Protein Tyrosine Phosphatase Non-Receptor Type 11) • IKZF1 (IKAROS Family Zinc Finger 1) • CHEK2 (Checkpoint kinase 2) • PAX5 (Paired Box 5) • EP300 (E1A binding protein p300) • TCF3 (Transcription Factor 3) • MEF2D (Myocyte Enhancer Factor 2D) • NUTM1 (NUT Midline Carcinoma Family Member 1) • ZNF384 (Zinc Finger Protein 384)
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KRAS mutation • NRAS mutation • RAS mutation • PTPN11 mutation • CHEK2 mutation • NRAS Q61 • FLT3 D835 • FLT3 D835V • NRAS Q61L • BLM mutation • IKZF1 mutation • KRAS Q61L • PAX5 fusion
over2years
Molecular mechanisms underlying the resistance of BRAF V600E-mutant metastatic colorectal cancer to EGFR/BRAF inhibitors. (PubMed, Ther Adv Med Oncol)
Multiple genetic alterations are associated with clinical benefits and resistance to EGFR/BRAF inhibitors in BRAF V600E-mutant mCRC. Our findings provide novel insights into strategies for overcoming resistance to EGFR/BRAF inhibitors in patients with BRAF V600E-mutant mCRC.
Journal
|
EGFR (Epidermal growth factor receptor) • KRAS (KRAS proto-oncogene GTPase) • MET (MET proto-oncogene, receptor tyrosine kinase) • NRAS (Neuroblastoma RAS viral oncogene homolog) • MAP2K1 (Mitogen-activated protein kinase kinase 1) • RNF43 (Ring Finger Protein 43) • PIK3R1 (Phosphoinositide-3-Kinase Regulatory Subunit 1)
|
BRAF V600E • EGFR mutation • BRAF V600 • MET amplification • KRAS G12D • KRAS G12 • NRAS Q61 • KRAS Q61H • NRAS G12D • RNF43 mutation • NRAS G12 • NRAS Q61L • MAP2K1 K57T • BRAF amplification • KRAS Q61L
over2years
Enhanced BRAF engagement by NRAS mutants capable of promoting melanoma initiation. (PubMed, Nat Commun)
Molecular dynamics simulations, combined with cell-based protein-protein interaction studies, reveal that melanomagenic NRAS mutants form intramolecular contacts that enhance BRAF binding affinity, BRAF-CRAF heterodimer formation, and MAPK > ERK signaling. Along with the allelic series of conditional mouse models we describe, these results establish a mechanistic basis for the enrichment of specific NRAS mutants in human melanoma.
Journal
|
BRAF (B-raf proto-oncogene) • NRAS (Neuroblastoma RAS viral oncogene homolog) • RAF1 (Raf-1 Proto-Oncogene Serine/Threonine Kinase)
|
BRAF mutation • NRAS mutation • NRAS Q61K • NRAS Q61 • NRAS Q61R • NRAS G12D • NRAS G12 • NRAS G13 • NRAS Q61L • NRAS G13D • NRAS G13R
over2years
HRAS Q61L Mutation as a Possible Target for Non-Small Cell Lung Cancer: Case Series and Review of Literature. (PubMed, Curr Oncol)
The clinical course of patients with HRAS-mutant NSCLC remains unclear. Furthers cases should be identified in order to clarify prognosis and response to therapies. Tipifarnib, a farnesyl transferase inhibitor, is a promising candidate to target HRAS-mutant tumours and should be explored in NSCLC patients.
Clinical • Review • Journal
|
HRAS (Harvey rat sarcoma viral oncogene homolog)
|
HRAS mutation • NRAS Q61L • HRAS Q61L
|
Zarnestra (tipifarnib)
over2years
Evaluation of treatment patterns in patients with BRAF-mutant cutaneous melanoma in adjuvant setting in real practice. (ASCO 2022)
In our retrospective study we found that among stage III BRAF-mutant patients monotherapy with aPD1 was the most common adjuvant treatment regimen. In some patients with stage III disease IFN-alfa is still given. More studies are needed to define best adjuvant treatment for BRAF mutant stage III melanoma pts.
Clinical
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BRAF (B-raf proto-oncogene) • NRAS (Neuroblastoma RAS viral oncogene homolog) • KIT (KIT proto-oncogene, receptor tyrosine kinase)
|
BRAF V600E • BRAF mutation • NRAS mutation • BRAF V600 • KIT mutation • BRAF V600K • BRAF wild-type • NRAS Q61K • NRAS Q61 • NRAS Q61R • BRAF K601E • NRAS G12D • NRAS Q61L • BRAF L597R • BRAF V600M • BRAF K601 • BRAF L597
over2years
Genomic and transcriptomic characterization of benign and malignant struma ovarii (AACR 2022)
In contrast to cancer arising from the thyroid gland, characterized by BRAFV600E as the most common mutation, malignant SO belongs to RAS-like tumors. The downregulation of tumor suppressors and upregulation of DMRT1 might be implicated in the malignant transformation of SO.
KRAS (KRAS proto-oncogene GTPase) • TP53 (Tumor protein P53) • NRAS (Neuroblastoma RAS viral oncogene homolog) • IDH2 (Isocitrate Dehydrogenase (NADP(+)) 2) • EP300 (E1A binding protein p300) • NSD1 (Nuclear Receptor Binding SET Domain Protein 1) • RAC1 (Rac Family Small GTPase 1) • GNAS (GNAS Complex Locus) • TP63 (Tumor protein 63) • DMRT1 (Doublesex And Mab-3 Related Transcription Factor 1)
|
TP53 mutation • BRAF V600E • BRAF V600 • KRAS G12V • KRAS G12 • NRAS Q61 • NRAS Q61R • NRAS G12 • NRAS G13 • NRAS Q61L • KRAS Q61L • NRAS G12V
|
TruSight RNA Pan-Cancer Panel
almost3years
DETECTION: Circulating Tumour DNA guidEd Therapy for Stage IIB/C mElanoma After surgiCal resecTION (clinicaltrials.gov)
P2/3, N=1050, Recruiting, The Christie NHS Foundation Trust | Not yet recruiting --> Recruiting
Enrollment open • Circulating tumor DNA
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BRAF (B-raf proto-oncogene) • NRAS (Neuroblastoma RAS viral oncogene homolog)
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BRAF V600E • BRAF V600 • BRAF V600K • NRAS Q61K • NRAS Q61 • NRAS Q61R • NRAS G12D • NRAS G12 • NRAS Q61L • BRAF V600R
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Opdivo (nivolumab)
almost3years
[VIRTUAL] Value of Comprehensive Clinical Molecular Testing in Delineating New Subtypes of Pediatric B-cell Lymphoblastic Leukemia/Lymphoma (B-ALL): A Single-Center Experience (AMP 2021)
Clinical molecular testing in our patients revealed gene alterations that provide refinement of diagnosis, prognosis, and risk stratification allowing the use of clinically actionable therapeutic targets in some cases. It also contributes toward a useful data set for further analysis and impactful targeted management. Longer-term follow-up incorporating therapy and outcomes information would be valuable.
Clinical • IO biomarker
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KRAS (KRAS proto-oncogene GTPase) • FLT3 (Fms-related tyrosine kinase 3) • NRAS (Neuroblastoma RAS viral oncogene homolog) • RUNX1 (RUNX Family Transcription Factor 1) • ETV6 (ETS Variant Transcription Factor 6) • PTPN11 (Protein Tyrosine Phosphatase Non-Receptor Type 11) • CRLF2 (Cytokine Receptor Like Factor 2) • IKZF1 (IKAROS Family Zinc Finger 1) • PAX5 (Paired Box 5) • EP300 (E1A binding protein p300) • TCF3 (Transcription Factor 3) • P2RY8 (P2Y Receptor Family Member 8) • MEF2D (Myocyte Enhancer Factor 2D)
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KRAS mutation • NRAS mutation • PTPN11 mutation • NRAS Q61 • FLT3 D835 • FLT3 D835V • NRAS Q61L • IKZF1 mutation • P2RY8-CRLF2 fusion • IGH-CRLF2 fusion • KRAS Q61L • KRAS deletion
3years
NMR H, C, N backbone resonance assignments of the T35S and oncogenic T35S/Q61L mutants of human KRAS4b in the active, GppNHp-bound conformation. (PubMed, Biomol NMR Assign)
High resolution NMR data allowed the unambiguous assignments of H-N correlation cross-peaks for all the residues except for Met1. Furthermore, 2D H-N HSQC overlay of two proteins assisted in determination of Q61L mutation-induced chemical shift perturbations for select residues in the regions of P-loop, Switch-II, and helix α3.
Journal
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KRAS (KRAS proto-oncogene GTPase) • STAT1 (Signal Transducer And Activator Of Transcription 1)
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KRAS mutation • NRAS Q61 • NRAS Q61L • KRAS Q61L
3years
DETECTION: Circulating Tumour DNA guidEd Therapy for Stage IIB/C mElanoma After surgiCal resecTION (clinicaltrials.gov)
P2/3, N=1050, Not yet recruiting, The Christie NHS Foundation Trust | Initiation date: Jun 2021 --> Sep 2021
Trial initiation date • Circulating tumor DNA
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BRAF (B-raf proto-oncogene) • NRAS (Neuroblastoma RAS viral oncogene homolog)
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BRAF V600E • BRAF V600 • BRAF V600K • NRAS Q61K • NRAS Q61 • NRAS Q61R • NRAS G12D • NRAS G12 • NRAS Q61L • BRAF V600R
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Opdivo (nivolumab)
over3years
Composite pheochromocytoma/paraganglioma-ganglioneuroma: analysis of SDH and ATRX status and identification of frequent HRAS and BRAF mutations. (PubMed, Endocr Connect)
We demonstrated that composite PCC/PGL-GN might be a unique entity with frequent HRAS and BRAF mutations rather than genetic changes of SDH and ATRX. Our findings revealed the possible pathogenesis of composite PCC/PGL-GN and provided clues for potential treatment targets.
Journal
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BRAF (B-raf proto-oncogene) • HRAS (Harvey rat sarcoma viral oncogene homolog) • ATRX (ATRX Chromatin Remodeler) • SDHB (Succinate Dehydrogenase Complex Iron Sulfur Subunit B)
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BRAF mutation • HRAS mutation • HRAS G13R • NRAS Q61R • BRAF K601E • NRAS Q61L • HRAS Q61L • HRAS Q61R • HRAS G13R • BRAF K601
over3years
Development of BRAF V600E Mutation in NRAS Q61L Mutated Rectal Cancer. (PubMed, Ann Clin Lab Sci)
Our findings suggest that a BRAF and NRAS developed co-mutation may lead to a distinct clinicopathological progression. BRAF-mutated CRCwill not benefit from anti-RAS targeted therapy.
Journal
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BRAF (B-raf proto-oncogene) • NRAS (Neuroblastoma RAS viral oncogene homolog)
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BRAF V600E • NRAS mutation • BRAF V600 • NRAS Q61 • NRAS Q61L