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BIOMARKER:

MTAP deletion

i
Other names: MTAP, Methylthioadenosine Phosphorylase, S-Methyl-5'-Thioadenosine Phosphorylase, MSAP, 5’-Methylthioadenosine Phosphorylase, MTA Phosphorylase, MTAPase, C86fus, Epididymis Secretory Sperm Binding Protein, Epididymis Luminal Protein 249, MeSAdo Phosphorylase, HEL-249, DMSMFH, DMSFH, LGMBF, BDMF
Entrez ID:
Related biomarkers:
8d
Actionable mutations in pancreatic cancer: where targeted therapies are making a difference. (PubMed, BMJ Open Gastroenterol)
It demonstrates that targeting these lesions can yield outcomes that meet or exceed the benchmarks set by the NAPOLI-1 trial (liposomal irinotecan plus 5-fluorouracil and leucovorin), with a median overall survival of 6.2 months and progression-free survival of 3.1 months. Objective response rates reach 33% with adagrasib in KRAS G12C PDAC, 22% with olaparib maintenance in germline BRCA1/2 cancers, and over 50% with RET or NTRK inhibitors with fusion alterations; pembrolizumab produces durable benefit in the 1-3% of tumours that are MSI-H/dMMR. Emerging data highlight NRG1 fusions (overall response rate 42% with zenocutuzumab), HER2 amplification, MTAP deletion with PRMT5 dependency and variant-specific (MRTX1133) or pan-RAS (daraxonrasib) inhibitors as the next frontier...Taken together, these advances represent a substantive therapeutic progress in PDAC over the past decades, even though they currently apply to a minority of patients. These findings underscore the necessity of comprehensive next-generation sequencing for every patient with advanced disease, enabling identification of rare, yet clinically meaningful, targets and moving PDAC management towards a precision-oncology paradigm.
Review • Journal • BRCA Biomarker • MSi-H Biomarker • PARP Biomarker • PD(L)-1 Biomarker
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HER-2 (Human epidermal growth factor receptor 2) • KRAS (KRAS proto-oncogene GTPase) • BRCA1 (Breast cancer 1, early onset) • BRCA2 (Breast cancer 2, early onset) • MSI (Microsatellite instability) • NRG1 (Neuregulin 1) • MTAP (Methylthioadenosine Phosphorylase) • NTRK (Neurotrophic receptor tyrosine kinase)
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KRAS mutation • MSI-H/dMMR • KRAS G12C • HER-2 amplification • MTAP deletion • NRG1 fusion • KRAS G12
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Keytruda (pembrolizumab) • Lynparza (olaparib) • 5-fluorouracil • Krazati (adagrasib) • Bizengri (zenocutuzumab-zbco) • leucovorin calcium • MRTX1133
16d
Clinical Significance of MTAP Deletions and their Overlap with Concurrent Oncogenic Driver Alterations Including EGFR in Non-Small Cell Lung Cancer. (PubMed, J Thorac Oncol)
MTAP dels frequently co-occur with oncogenic driver alterations and can develop at time of osimertinib resistance. A patient with oncogenic driver-positive, MTAP-del NSCLC had a partial response to PRMT5 inhibitor treatment. This work could inform future trials of PRMT5 and MAT2A inhibitors.
Journal
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EGFR (Epidermal growth factor receptor) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • MTAP (Methylthioadenosine Phosphorylase) • MAT2A (Methionine Adenosyltransferase 2A)
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EGFR mutation • CDKN2A deletion • MTAP deletion
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MSK-IMPACT
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Tagrisso (osimertinib) • BMS‐986504
23d
Targeting PRMT5 in cancer: Mechanistic insights and clinical progress. (PubMed, Biomed Pharmacother)
Ongoing investigations will be critical to define the therapeutic window of PRMT5 inhibition and to optimize rational combination strategies. This review provides a comprehensive overview of current insights into the oncogenic functions of PRMT5 and highlights emerging therapeutic strategies aimed at improving cancer treatment.
Review • Journal
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MTAP (Methylthioadenosine Phosphorylase) • PRMT5 (Protein Arginine Methyltransferase 5)
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MTAP deletion
29d
MTAP Loss Correlates With Favorable Prognosis in HPV-independent, p16-negative Oropharyngeal Squamous Cell Carcinoma. (PubMed, Am J Surg Pathol)
Because MTAP is related to the methionine salvage pathway, various cancer cell lines with MTAP deletion have been reported to exhibit increased sensitivity to the pyrimidine analog 5-fluorouracil (5-FU)...MTAP deficiency is closely associated with homozygous CDKN2A and MTAP deletions in HPV-negative/p16-negative OPSCCs. Furthermore, MTAP loss may be a favorable prognostic factor in HPV-negative OPSCC, and this paradoxical phenomenon might be explained by the enhanced efficacy of chemotherapy with pyrimidine analogs.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • MTAP (Methylthioadenosine Phosphorylase)
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CDKN2A deletion • MTAP deletion
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5-fluorouracil
2ms
Tumor suppressor collateral damage screens reveal mRNA homeostasis protein HBS1L as a novel vulnerability in ch9p21 driven FOCAD deleted cancer. (PubMed, Biochim Biophys Acta Mol Cell Res)
In vivo, HBS1L deletion eliminated growth of FOCAD-deleted tumors. Here we propose a model where the FOCAD/SKI complex and HBS1L/PELO work together to resolve aberrant mRNA-induced ribosomal stalling, making the HBS1L/PELO complex an intriguing novel target for treating FOCAD-deleted tumors.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • MTAP (Methylthioadenosine Phosphorylase) • CDKN2B (Cyclin Dependent Kinase Inhibitor 2B)
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CDKN2A deletion • MTAP deletion
2ms
MTAP deficiency confers resistance to cytosolic nucleic acid sensing and STING agonists. (PubMed, Science)
Targeting polyamine biosynthesis reverses IRF3 down-regulation, restoring sensitivity to STING agonists in MTAP-deficient tumors. Our findings suggest that MTAP genetic status may inform patient responses to STING agonist therapy and offer an alternative strategy for boosting antitumor immune responses using STING agonists in MTAP-deleted tumors.
Journal
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MTAP (Methylthioadenosine Phosphorylase) • STING (stimulator of interferon response cGAMP interactor 1)
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MTAP deletion
2ms
Methylthioadenosine Phosphorylase (MTAP) and p16 Expression in Melanocytic Nevi and Melanoma with Molecular Correlation. (PubMed, Am J Dermatopathol)
This finding may have implications for the susceptibility of melanoma to PRMT5 and related inhibitors. Methylthioadenosine Phosphorylase (MTAP) and p16 Expression in Melanocytic Nevi and Melanoma with Molecular Correlation.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • MTAP (Methylthioadenosine Phosphorylase)
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CDKN2A deletion • MTAP deletion
3ms
PRMT5 Inhibition Hits a Nerve (Sheath Tumor): A Targeted Strategy for MPNSTs. (PubMed, Clin Cancer Res)
PRMT5 inhibitors represent a promising therapeutic approach for multiple cancers, but their clinical development is hindered by toxicity to normal cells. Synthetic lethality approaches using MTAP-cooperative PRMT5 inhibitors offer a compelling strategy that selectively targets cancer cells in nerve sheath sarcomas and other MTAP-deleted tumors.
Journal
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MTAP (Methylthioadenosine Phosphorylase)
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MTAP deletion
3ms
PRMT5: A Promising Synthetical Lethal Target for MTAP-Deleted Cancers. (PubMed, J Med Chem)
In this perspective, we analyzed the different binding modes between PRMT5·MTA and PRMT5·SAM complexes and highlighted the discovery of the second-generation MTA-cooperative PRMT5 inhibitors with the guidance of their cocrystal structures bound to the PRMT5·MTA complex. We also discussed the challenges and opportunities of these synthetic lethal inhibitors to shed light on future drug development.
Review • Journal
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MTAP (Methylthioadenosine Phosphorylase)
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MTAP deletion
3ms
Protein arginine methyltransferase 5 sustains Tip60-EP400 complex via SRSF1 in Merkel cell carcinoma. (PubMed, Life Sci Alliance)
PRMT5 inhibition disrupts this recruitment, leading to widespread splicing defects, including exon skipping and intron retention. These results provide new insights into PRMT5's role in splicing regulation and may have broader implications for targeting splicing dysregulation in MYC-driven cancers.
Journal
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TP53 (Tumor protein P53) • MTAP (Methylthioadenosine Phosphorylase) • MYCL (MYCL Proto-Oncogene BHLH Transcription Factor) • PRMT5 (Protein Arginine Methyltransferase 5) • EP400 (E1A Binding Protein P400)
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TP53 wild-type • MTAP deletion
4ms
A Phase 1/2 Study of AMG 193 in Combination With IDE397 in Participants With Advanced Methylthioadenosine Phosphorylase (MTAP)-Null Solid Tumors (clinicaltrials.gov)
P1/2, N=53, Active, not recruiting, Amgen | Trial completion date: Aug 2025 --> Jan 2026 | Trial primary completion date: Aug 2025 --> Jan 2026
Trial completion date • Trial primary completion date
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MTAP (Methylthioadenosine Phosphorylase)
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MTAP deletion
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IDE397 • AMG 193
4ms
A systematic literature review of MTAP deletions in solid and hematologic Cancers. (PubMed, Cancer Treat Res Commun)
This is the first systematic review to summarize the literature on MTAP deletions or loss of expression across several solid and hematologic cancers. MTAP deletions and/or loss of expression occur in many cancer types, presenting a promising target for pan-cancer therapy.
Review • Journal
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KRAS (KRAS proto-oncogene GTPase) • MTAP (Methylthioadenosine Phosphorylase)
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MTAP deletion