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DRUG CLASS:

LSD1 inhibitor

18h
IMG-7289 in Patients with Essential Thrombocythemia (ET) or Polycythemia Vera (PV) (clinicaltrials.gov)
P2, N=4, Active, not recruiting, Terrence J Bradley, MD | Trial completion date: Oct 2025 --> Oct 2026 | Trial primary completion date: Oct 2024 --> Oct 2025
Trial completion date • Trial primary completion date
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bomedemstat (MK-3543)
18h
VenBom: Venetoclax and Bomedemstat in Patients with Relapsed/Refractory Acute Myeloid Leukemia (clinicaltrials.gov)
P1, N=18, Suspended, Terrence J Bradley, MD | Recruiting --> Suspended | Trial primary completion date: Nov 2024 --> Nov 2025
Trial suspension • Trial primary completion date • Combination therapy
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Venclexta (venetoclax) • bomedemstat (MK-3543)
10d
A Study of TAS1440 With ATRA in Subjects With r/r AML (clinicaltrials.gov)
P1, N=52, Terminated, Taiho Oncology, Inc. | N=80 --> 52 | Trial completion date: Dec 2025 --> Feb 2024 | Active, not recruiting --> Terminated | Trial primary completion date: Dec 2025 --> Feb 2024; The study was terminated due to the changing treatment landscape, difficulty in enrolling eligible participants, and little likelihood of providing meaningful clinical benefit for the participants.
Enrollment change • Trial completion date • Trial termination • Trial primary completion date • Combination therapy
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Vesanoid (tretinoin)
13d
KDM1A epigenetically enhances RAD51 expression to suppress the STING-associated anti-tumor immunity in esophageal squamous cell carcinoma. (PubMed, Cell Death Dis)
Overall, our findings not only indicate that KDM1A is a promising target for ESCC patients at early stages but also provide novel mechanistic insights into its spatial regulation of STING-associated anti-tumor immunity in sTILs to drive the oncogenic processes in ESCC. The translation of these findings will ultimately guide more appropriate combinations of spatial immunotherapies with KDM1A inhibitors to improve the overall survival of specific subgroups in ESCC.
Journal • IO biomarker
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IL6 (Interleukin 6) • RAD51 (RAD51 Homolog A) • KDM1A (Lysine Demethylase 1A) • STING (stimulator of interferon response cGAMP interactor 1) • IL1B (Interleukin 1, beta)
14d
Optimization and Biological Evaluation of Novel 1H-Pyrrolo[2,3-c]pyridin Derivatives as Potent and Reversible Lysine Specific Demethylase 1 Inhibitors for the Treatment of Acute Myelogenous Leukemia. (PubMed, J Med Chem)
Notably, the most promising compound 23e showed a favorable oral PK profile and effectively suppressed the tumor growth in an AML xenograft model. Overall, our medicinal chemistry efforts provide compound 23e as a lead compound for developing LSD1 inhibitors for the treatment of AML and other advanced malignancies.
Journal
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CD86 (CD86 Molecule)
15d
Unlocking the dual role of LSD1 in tumor immunity: innate and adaptive pathways. (PubMed, Theranostics)
In this review, we outline the role of LSD1 in tumor immunity in terms of both innate and adaptive immunity, summarizing the mechanisms associated with LSD1-mediated tumor immunity and its potential regulatory capacity in tumor immune escape. Finally, we summarize the research status of LSD1 inhibitors in tumor immunotherapy, which be valuable for promoting the development of effective LSD1-targeted agents used as combination immunotherapy drugs.
Review • Journal • IO biomarker
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KDM1A (Lysine Demethylase 1A)
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KDM1A expression
15d
KDM1A-mediated ZFP64 demethylation activates CENPL to promote epithelial ovarian cancer progression. (PubMed, Cytotechnology)
Collectively, KDM1A promoted EOC cell proliferation, migration, and invasion, and reduced apoptosis by activating the ZFP64/CENPL axis, which triggered EOC progression. The online version contains supplementary material available at 10.1007/s10616-024-00671-w.
Journal
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KDM1A (Lysine Demethylase 1A)
21d
LSD1 Demethylates and Destabilizes Autophagy Protein LC3B in Ovarian Cancer. (PubMed, Biomolecules)
Mechanistically, LSD1 demethylates LC3B, leading to decreased LC3B stability. The observed inverse correlation between LSD1 expression and LC3B protein levels in clinical samples underscores the need for further investigation to elucidate how reduced LC3B protein levels induced by LSD1 demethylation may contribute to ovarian cancer.
Journal
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KDM1A (Lysine Demethylase 1A)
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KDM1A expression
22d
Bomedemstat vs Hydroxyurea for Essential Thrombocythemia (MK-3543-007) (clinicaltrials.gov)
P3, N=300, Recruiting, Merck Sharp & Dohme LLC | Trial primary completion date: May 2029 --> Apr 2027
Trial primary completion date
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hydroxyurea • bomedemstat (MK-3543)
28d
Pulrodemstat, a selective inhibitor of KDM1A, suppresses head and neck squamous cell carcinoma growth by triggering apoptosis. (PubMed, BMC Pharmacol Toxicol)
Pulrodemstat is an effective therapeutic drug for HNSCC. Thus, the TET3/KDM1A axis may account for the malignant phenotype of HNSCC.
Journal
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KDM1A (Lysine Demethylase 1A)
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KDM1A expression
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5-fluorouracil • pulrodemstat (CC-90011)
30d
LSD1 inhibition attenuates targeted therapy-induced lineage plasticity in BRAF V600E colorectal cancer. (PubMed, bioRxiv)
Importantly, inhibition of the lysine demethylase LSD1 with a clinically relevant inhibitor attenuated targeted therapy-induced EEC enrichment through blocking the interaction of LSD1, CoREST2 and STAT3. Our findings that BRAF plus EGFR inhibition induces lineage plasticity in BRAF V600E CRC represents a new paradigm for how resistance to BRAF plus EGFR inhibition occurs and our finding that LSD1 inhibition blocks lineage plasticity has the potential to improve responses to BRAF plus EGFR inhibitor therapy in patients.
Journal
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BRAF (B-raf proto-oncogene) • STAT3 (Signal Transducer And Activator Of Transcription 3)
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BRAF V600E • BRAF V600 • BRAF wild-type
1m
Discovery of Novel 5-Cyano-3-phenylindole-Based LSD1/HDAC Dual Inhibitors for Colorectal Cancer Treatment. (PubMed, J Med Chem)
Compound 20c effectively modulated the expression of biomarkers associated with LSD1 and HDAC inhibition and demonstrated superior antiproliferative activity compared to SAHA and 4SC-202 across multiple colorectal cancer cell lines...It demonstrated significantly enhanced antitumor efficacy compared to SAHA, without causing observable toxicity. These findings highlight the potential of LSD1/HDAC dual inhibitors for the treatment of malignant cancers.
Journal
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HDAC1 (Histone Deacetylase 1)
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Zolinza (vorinostat) • domatinostat (4SC-202)
1m
LSD1 deficiency in breast cancer cells promotes the formation of pre-metastatic niches. (PubMed, NPJ Precis Oncol)
And miR-1270 inhibited ZO-1 expression in human endothelial cells, which enhanced their permeability. Our study uncovered a novel mechanism in which the LSD1 promotes the formation of pre-metastatic niches via the regulation of exosomal miRNA.
Journal • Metastases
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TJP1 (Tight Junction Protein 1) • MIR127 (MicroRNA 127) • OCLN (Occludin)
1m
New P3 trial
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CD4 (CD4 Molecule)
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hydroxyurea • bomedemstat (MK-3543)
1m
ZNF480 Accelerates Chemotherapy Resistance in Breast Cancer by Competing With TRIM28 and Stabilizing LSD1 to Upregulate the AKT-GSK3β-Snail Pathway. (PubMed, Mol Carcinog)
Ipragliflozin was identified as a small-molecule inhibitor of ZNF480 and LSD1 interaction that may block breast cancer progression...Mechanistically, ZNF480 accelerates proliferation and neoadjuvant chemotherapy resistance in breast cancer cells via the AKT-GSK3β-Snail pathway by interacting with and stabilizing LSD1 in a competitive manner within TRIM28. This research has implications for developing targeted drugs against chemotherapy resistance in breast cancer.
Journal
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TRIM28 (Tripartite Motif Containing 28)
1m
Novel pharmacologic inhibition of lysine-specific demethylase 1 as a potential therapeutic for glioblastoma. (PubMed, Cancer Gene Ther)
The altered H3K4me2/H3K4me3 status induced by S2172 treatment affected the expression of genes related to tumorigenesis. Our data suggest that targeting LSD1 with S2172 could provide a promising treatment option for glioblastomas, particularly due to targeting of GSC populations.
Journal
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NES (Nestin)
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MYC expression
1m
Target Ligand Separation and Identification of Isoforsythiaside as a Histone Lysine-Specific Demethylase 1 Covalent Inhibitor Against Breast Cancer Metastasis. (PubMed, J Med Chem)
Moreover, RBMS3/Twist1/MMP2, the downstream signaling pathway of LSD1, was activated after IFA treatment to inhibit the metastasis of MDA-MB-231 cells in vitro and in vivo. This study provided novel molecular templates for development of LSD1 covalence-binding inhibitor and laid a foundation for developing agents against breast carcinoma metastasis for targeting LSD1.
Journal
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MMP2 (Matrix metallopeptidase 2) • TWIST1 (Twist Family BHLH Transcription Factor 1) • RBMS3 (RNA Binding Motif Single Stranded Interacting Protein 3)
2ms
Testing the Combination of an Anti-Cancer Drug, Iadademstat, With Other Anti-Cancer Drugs (Venetoclax and Azacitidine) for Treating AML (clinicaltrials.gov)
P1, N=45, Recruiting, National Cancer Institute (NCI) | Not yet recruiting --> Recruiting | Initiation date: Oct 2024 --> Jul 2025
Enrollment open • Trial initiation date
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TP53 (Tumor protein P53) • BCL2 (B-cell CLL/lymphoma 2) • NF1 (Neurofibromin 1) • MCL1 (Myeloid cell leukemia 1) • BCL2L1 (BCL2-like 1) • BAX (BCL2-associated X protein)
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BCL2 mutation • MCL1 expression
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Venclexta (venetoclax) • azacitidine • iadademstat (ORY-1001)
2ms
Unraveling the Role of JMJD1B in Genome Stability and the Malignancy of Melanomas. (PubMed, Int J Mol Sci)
Our findings highlight JMJD1B's role in maintaining genome integrity by ensuring a proper histone supply to the nucleus, expanding its function beyond gene expression regulation. JMJD1B emerges as a crucial player in preserving genome stability and the development of melanoma, with a potential role as a safeguard against oncogenic mutations.
Journal • Tumor mutational burden
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TMB (Tumor Mutational Burden)
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TMB-L
3ms
LSD1 and CoREST2 Potentiate STAT3 Activity to Promote Enteroendocrine Cell Differentiation in Mucinous Colorectal Cancer. (PubMed, Cancer Res)
Knockdown of CoREST2 in an orthotopic xenograft mouse model resulted in decreased primary tumor growth and lung metastases. Collectively, these results provide rationale for developing LSD1 inhibitors that target the interaction between LSD1 and STAT3 or CoREST2, which may improve clinical outcomes for patients with mCRC.
Journal
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STAT3 (Signal Transducer And Activator Of Transcription 3)
3ms
Enrollment open
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bomedemstat (MK-3543)
3ms
Apigenin inhibits lipid metabolism of hepatocellular carcinoma cells by targeting the histone demethylase KDM1A. (PubMed, Phytomedicine)
In conclusion, our study provides compelling evidence that apigenin inhibits liver cancer progression and elucidates its mechanism of action in regulating lipid metabolism. Specifically, we find that apigenin suppresses the progression of HCC cells by downregulating genes involved in lipid metabolism. Additionally, our results indicate that KDM1A acts as a downstream target of apigenin in the inhibition of lipid metabolism in HCC. These findings offer experimental support for the potential use of apigenin as a therapeutic agent for liver cancer, highlighting its relevance in future clinical applications.
Journal • Epigenetic controller
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KDM1A (Lysine Demethylase 1A)
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KDM1A overexpression • KDM1A expression
3ms
Bomedemstat and Maintenance Immunotherapy for Treatment of Newly Diagnosed Extensive Stage Small Cell Lung Cancer (clinicaltrials.gov)
P1/2, N=3, Terminated, University of Washington | Trial completion date: Jan 2026 --> Apr 2024 | Active, not recruiting --> Terminated; Closed per SRC Low Accrual Policy
Trial completion date • Trial termination
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Tecentriq (atezolizumab) • bomedemstat (MK-3543)
3ms
USP1-mediated deubiquitination of KDM1A promotes the malignant progression of triple-negative breast cancer. (PubMed, J Biochem Mol Toxicol)
In conclusion, YY1 upregulation increased KDM1A expression via transcriptional activation. USP1 stabilized KDM1A through deubiquitination to promote TNBC progression.
Journal
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KDM1A (Lysine Demethylase 1A) • USP1 (Ubiquitin Specific Peptidase 1) • YY1 (YY1 Transcription Factor)
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KDM1A expression
3ms
LSD1 is a promising target to treat cancers by modulating cell stemness. (PubMed, Biochem Pharmacol)
Herein, in this review, we summarized the mechanisms how LSD1 regulates cell stemness comprehensively. In addition, some related inhibitors targeting LSD1 to reduce the proliferation characteristics of cancer stem cells are also described.
Review • Journal
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KDM1A (Lysine Demethylase 1A)
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KDM1A expression
3ms
New P1 trial
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bomedemstat (MK-3543)
3ms
Extension Study of Bomedemstat (IMG-7289/MK-3543) in Participants With Myeloproliferative Neoplasms (IMG-7289-CTP-202/MK-3543-005) (clinicaltrials.gov)
P2, N=81, Completed, Imago BioSciences, Inc., a subsidiary of Merck & Co., Inc., (Rahway, New Jersey USA) | Active, not recruiting --> Completed
Trial completion
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bomedemstat (MK-3543)
3ms
Journal
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NOTCH1 (Notch 1) • NOTCH3 (Notch Receptor 3) • KDM1A (Lysine Demethylase 1A) • HES1 (Hes Family BHLH Transcription Factor 1)
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KDM1A expression • NOTCH1 overexpression
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iadademstat (ORY-1001)
3ms
Discovery of 2-Aryl-4-aminoquinazolin-Based LSD1 Inhibitors to Activate Immune Response in Gastric Cancer. (PubMed, J Med Chem)
In vivo, Z-1 exhibited significant suppression effect on the growth of gastric cancer cells without obvious toxicity. Therefore, Z-1 represents a potential novel immunomodulator that targets LSD1, providing a lead compound with new function mechanism for gastric cancer treatment.
Journal • PD(L)-1 Biomarker • IO biomarker
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PD-L1 (Programmed death ligand 1) • PD-1 (Programmed cell death 1)
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PD-L1 expression
3ms
LSD1 inhibits the invasion and migration of breast cancer through exosomes. (PubMed, Sci Rep)
By analyzing the database of miR-1290 target gene NAT1, we verified that miR-1290 could regulate the expression of NAT1. These data provide fresh insights into the biology of breast cancer therapy by demonstrating how the epigenetic factor LSD1 stimulates the breast cancer cells' invasion and migration via controlling exosomal miRNA.
Journal
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MIR1290 (MicroRNA 1290) • NAT1 (N-Acetyltransferase 1)
3ms
HSP90/LSD1 dual inhibitors against prostate cancer as well as patient-derived colorectal organoids. (PubMed, Eur J Med Chem)
Notably, no difference in eye size or morphology was observed in the zebrafish treated with compound 6 compared to the reference group (AUY922). The profound treatment response in docetaxel-resistant PC-3 cells highlighted the dual inhibitory ability in improving docetaxel sensitivity. Additionally, at a minimum concentration of 1.25 μM, compound 6 effectively inhibited the growth of patient-derived colorectal cancer (CRC) organoids for up to 10 days in vitro. Together, the designed HSP90/LSD1 inhibitors present a novel route and significant clinical value for anti-cancer drug therapy.
Journal
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BCL2L1 (BCL2-like 1) • HSP90AA1 (Heat Shock Protein 90 Alpha Family Class A Member 1Heat Shock Protein 90 Alpha Family Class A Member 1)
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docetaxel • luminespib (AUY922)
4ms
LSD1 inhibition improves efficacy of adoptive T cell therapy by enhancing CD8+ T cell responsiveness. (PubMed, Nat Commun)
In addition, the combination of anti-PDL1 treatment with LSD1i-based ACT eradicates the tumor and leads to long-lasting tumor-free survival in a melanoma model, complementing the limited efficacy of the immune or epigenetic therapy alone. Collectively, these results demonstrate that LSD1 modulation improves antitumoral responses generated by ACT and anti-PDL1 therapy, providing the foundation for their clinical evaluation.
Journal
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CD8 (cluster of differentiation 8)
4ms
Trial completion • Combination therapy
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Opdivo (nivolumab) • cisplatin • carboplatin • etoposide IV • pulrodemstat (CC-90011)
4ms
Primary Unilateral Macronodular Adrenal Hyperplasia With Concomitant Glucocorticoid And Androgen Excess And KDM1A Inactivation. (PubMed, Eur J Endocrinol)
We investigated the first PUMAH associated with severe Cushing's syndrome and concomitant androgen excess, suggesting pathogenic mechanisms involving KDM1A.
Journal
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KDM1A (Lysine Demethylase 1A)
4ms
Restoration of TFPI2 by LSD1 Inhibition Suppresses Tumor Progression and Potentiates Antitumor Immunity in Breast Cancer. (PubMed, Cancer Lett)
Moreover, induction of TFPI2 potentiates antitumor effect of LSD1 inhibitor and immune checkpoint blockade in poorly immunogenic TNBC. Together, our study identifies previously unrecognized roles of TFPI2 in LSD1-mediated TNBC progression, therapeutic response, and immunogenic effects.
Journal • BRCA Biomarker
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ER (Estrogen receptor) • BRCA1 (Breast cancer 1, early onset) • CD8 (cluster of differentiation 8) • KDM1A (Lysine Demethylase 1A)
4ms
LSD1 inhibition by tranylcypromine hydrochloride reduces alkali burn-induced corneal neovascularization and ferroptosis by suppressing HIF-1α pathway. (PubMed, Front Pharmacol)
Additionally, AG490 injection effectively reduced HIF-1α and VEGFA expression in the CNV model. These findings suggest that LSD1 inhibition via the HIF-1α-driven pathway prevents angiogenesis, oxidative stress, and ferroptosis in corneal alkali burn-induced CNV, highlighting LSD1 as a potential therapeutic target.
Journal
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HIF1A (Hypoxia inducible factor 1, alpha subunit) • GPX4 (Glutathione Peroxidase 4)
5ms
From the First Case Reports to KDM1A Identification: 35 Years of Food (GIP)-Dependent Cushing's Syndrome. (PubMed, Exp Clin Endocrinol Diabetes)
These new insights allow us to propose the KDM1A genetic screening to all PBMAH patients with signs of FDCS (low fasting cortisol that increases after a mixed meal or oral glucose load) and to all first-degree relatives of KDM1A variant carriers. Given that KDM1A is a tumor suppressor gene that has also been associated with monoclonal gammopathy of uncertain significance and multiple myeloma, the investigation of FDCS in the diagnostic management of patients with PBMAH and further genetic testing and screening for malignancies should be encouraged.
Journal
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KDM1A (Lysine Demethylase 1A)
5ms
New P1 trial • Combination therapy • IO biomarker
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TP53 (Tumor protein P53) • BCL2 (B-cell CLL/lymphoma 2) • NF1 (Neurofibromin 1) • MCL1 (Myeloid cell leukemia 1) • BCL2L1 (BCL2-like 1) • BAX (BCL2-associated X protein)
|
Venclexta (venetoclax) • azacitidine • iadademstat (ORY-1001)
5ms
New P1 trial
|
iadademstat (ORY-1001)
5ms
Trial completion date
|
FLT3 (Fms-related tyrosine kinase 3)
|
Xospata (gilteritinib) • iadademstat (ORY-1001)
5ms
KDM1A/LSD1 inhibition enhances chemotherapy response in ovarian cancer. (PubMed, Mol Carcinog)
Western blot analysis show that treatment with chemotherapy drugs cisplatin, carboplatin, and paclitaxel increased KDM1A expression in OCa cells. KDM1A knockdown (KD) or treatment with KDM1A inhibitors NCD38 and SP2509 sensitized established and patient-derived OCa cells to chemotherapy drugs in reducing cell viability and clonogenic survival and inducing apoptosis...Importantly, KDM1A-KD, in combination with cisplatin, significantly reduced tumor growth compared to a single treatment in an orthotopic intrabursal OCa xenograft model. Collectively, these findings suggest that combination of KDM1A inhibitors with chemotherapy could be a promising therapeutic approach for the treatment of OCa.
Journal
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KDM1A (Lysine Demethylase 1A)
|
cisplatin • carboplatin • paclitaxel • SP-2509
5ms
Bomedemstat vs Hydroxyurea for Essential Thrombocythemia (MK-3543-007) (clinicaltrials.gov)
P3, N=300, Recruiting, Merck Sharp & Dohme LLC | Not yet recruiting --> Recruiting
Enrollment open
|
hydroxyurea • bomedemstat (MK-3543)