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BIOMARKER:

KDM6A expression

i
Other names: KDM6A, Lysine Demethylase 6A, KABUK2
Entrez ID:
Related biomarkers:
Associations
Trials
24d
Inherited KDM6AA649T facilitates tumor-immune escape and exacerbates colorectal signet-ring cell carcinoma outcomes. (PubMed, Oncogene)
Besides, expression of KDM6AA694T in immune cells suppresses inflammatory macrophage response and effector T cell response. In conclusion, we characterized a novel inherited KDM6AA694T mutant from a childhood-onset SRCC case and demonstrated that the mutant with impaired H3K27me3 demethylase activity could potentiate tumor malignancy and suppress antitumor immunity.
Journal
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KDM6A (Lysine Demethylase 6A)
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KDM6A mutation • KDM6A expression
3ms
Epigenetic Targeting to Overcome Radioresistance in Head and Neck Cancer. (PubMed, Cancers (Basel))
(4) Within this study, we investigated cellular and molecular mechanisms underlying irradiation-induced cellular plasticity, a key inducer of radioresistance, with a focus on epigenetic alterations. We identified UTX (KDM6A) as a putative prognostic and therapeutic target for HNSCC patients treated with radiotherapy.
Journal
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KDM6A (Lysine Demethylase 6A) • KDM6B (Lysine Demethylase 6B)
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KDM6A expression
6ms
KDM6A Modulates Anti-Tumor Immune Response By Integrating Immunogenic Cell Death in Human Acute Myeloid Leukemia (ASH 2023)
We have identified that in comparison to control AML cells, deficiency of KDM6A (KDM6A-kd) associated with daunorubicin/etoposide-induced ICD, which was manifested by significant increase (2-3 fold, P<0.05) in ecto-CRT, plasma membrane exposure of pE1F2α, HSP70 and HSP90 with extracellular release of HMGB1 and ATP. In addition, olaparib and GSK-J4 treatment showed additive effects in ICD and immune activation using primary AML CD34+ cells. Together, we illustrate that KDM6A regulates ICD through epigenetic mechanisms, while KDM6A deficient AML subtypes could be sensitized with immunomodulatory targeted therapy.
Tumor mutational burden • BRCA Biomarker • PARP Biomarker • IO biomarker
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TMB (Tumor Mutational Burden) • KDM6A (Lysine Demethylase 6A) • CD34 (CD34 molecule) • HMGB1 (High Mobility Group Box 1) • CALR (Calreticulin) • HSPA5 (Heat Shock Protein Family A (Hsp70) Member 5) • STAT1 (Signal Transducer And Activator Of Transcription 1) • ATF4 (Activating Transcription Factor 4) • CD80 (CD80 Molecule) • CD86 (CD86 Molecule) • HSP90AA1 (Heat Shock Protein 90 Alpha Family Class A Member 1Heat Shock Protein 90 Alpha Family Class A Member 1) • IFNB1 (Interferon Beta 1) • NKG2D (killer cell lectin like receptor K1) • RAET1G (Retinoic Acid Early Transcript 1G) • ULBP1 (UL16 Binding Protein 1)
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TMB-L • KDM6A expression
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Lynparza (olaparib) • etoposide IV • daunorubicin • GSKJ4
12ms
Downregulated KDM6A mediates gastric carcinogenesis via Wnt/β-catenin signaling pathway mediated epithelial-to-mesenchymal transition. (PubMed, Pathol Res Pract)
Then, we used ICG001 to block the Wnt/β-catenin signal transduction pathway, and the results revealed that ICG001 could reduce the promoting effect of low KDM6A expression on aggressiveness and EMT in GC cells...The EMT is inhibited by regulating theWnt/β-catenin signaling by KDM6A, which reduces GC cell proliferation, migration, and invasion. KDM6A may be a viable target for GC in clinical therapy.
Journal
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MYC (V-myc avian myelocytomatosis viral oncogene homolog) • CCND1 (Cyclin D1) • CDH1 (Cadherin 1) • KDM6A (Lysine Demethylase 6A) • VIM (Vimentin) • CDH2 (Cadherin 2)
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CCND1 expression • CDH1 expression • VIM expression • KDM6A expression
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foscenvivint (PRI724)
1year
KDM6 demethylases integrate DNA repair gene regulation and loss of KDM6A sensitizes human acute myeloid leukemia to PARP and BCL2 inhibition. (PubMed, Leukemia)
Olaparib treatment reduced engraftment of KDM6A-mutant-AML-patient-derived xenografts, highlighting synthetic lethality using Poly-(ADP-ribose)-polymerase-(PARP)-inhibition. Crucially, a higher KDM6A expression is correlated with venetoclax tolerance...Corroborating these results, dual targeting of PARP and BCL2 was superior to PARP or BCL2 inhibitor monotherapy in inducing AML apoptosis, and primary AML cells carrying KDM6A-domain mutations were even more sensitive to the combination. Together, our study illustrates a mechanistic rationale in support of a novel combination therapy for AML based on subtype-heterogeneity, and establishes KDM6A as a molecular regulator for determining therapeutic efficacy.
Journal • PARP Biomarker • IO biomarker • Epigenetic controller
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KDM6A (Lysine Demethylase 6A) • BCL2A1 (BCL2 Related Protein A1) • KDM6B (Lysine Demethylase 6B)
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BCL2 expression • KDM6A mutation • KDM6A expression
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Venclexta (venetoclax) • Lynparza (olaparib)
1year
Lysine-specific demethylase 6A upregulates cadherin-1 and accelerates gastric cancer growth. (PubMed, Curr Pharm Biotechnol)
KDM6A knockdown also inhibited metastatic behaviors of injected NCI-N87 cells, as well as elevated CDH1 expression, leading to reversed epithelial-mesenchymal transition. Conclusion KDM6A serves as an oncogene in GC and exerts its pro-tumor functions by repressing the expression of CDH1.
Journal
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CDH1 (Cadherin 1) • KDM6A (Lysine Demethylase 6A)
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CDH1 expression • KDM6A expression
over1year
Opposing Effects of KDM6A and JDP2 on Glucocorticoid Sensitivity in T-ALL (ASH 2022)
In an unbiased in vivo screen to discover GC resistance mechanisms, we transplanted and treated 10 primary mouse T-ALLs initiated by retroviral insertional mutagenesis with the GC dexamethasone (DEX) (Wandler et al., 2020). We also unexpectedly found that KDM6A inactivation sensitizes T-ALL cells to GC treatment and hypothesize that this results in strong selective pressure for the outgrowth of GC-resistant clones due to JDP2 over-expression and other mechanisms. The FDA-approved BCL-2 inhibitor venetoclax and H3K27me3 inhibition are rational therapeutic approaches for potentially overcoming adaptive GC resistance in relapsed patients with KDM6A-mutant T-ALL.
IO biomarker
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KDM6A (Lysine Demethylase 6A) • CASP3 (Caspase 3) • JDP2 (Jun Dimerization Protein 2) • NR3C1 (Nuclear Receptor Subfamily 3 Group C Member 1)
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KDM6A mutation • JDP2 overexpression • KDM6A expression
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Venclexta (venetoclax)
over1year
Genome-Wide CRISPR-Cas9 Screen Identifies KDM6A As a Modulator of Daratumumab Sensitivity in Multiple Myeloma (ASH 2022)
Taken together, our studies demonstrate that KDM6A regulates CD38 and CD48 expression in MM. Moreover, we validate that combination treatment with FDA-approved EZH2 inhibitor and Dara can overcome Dara resistance in preclinical MM models, providing the rationale for combination clinical trials to overcome Dara resistance and improve patient outcome.
IO biomarker
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EZH2 (Enhancer of zeste 2 polycomb repressive complex 2 subunit) • KDM6A (Lysine Demethylase 6A) • GZMB (Granzyme B)
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CD38 expression • KDM6A expression
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Darzalex (daratumumab)
2years
KDM6B Regulates Prostate Cancer Cell Proliferation by Controlling c-MYC Expression. (PubMed, Mol Pharmacol)
GSK-J4 decreased proliferation and cell counting. Consequently, we conclude that KDM6B controlling c-MYC, CCND1 and pRb contribute regulation of PCa proliferation.
Journal
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MYC (V-myc avian myelocytomatosis viral oncogene homolog) • NF1 (Neurofibromin 1) • CCND1 (Cyclin D1) • NF2 (Neurofibromin 2) • KDM6A (Lysine Demethylase 6A) • EPHB2 (EPH Receptor B2) • KDM6B (Lysine Demethylase 6B) • CTBP1 (C-Terminal Binding Protein 1)
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MYC expression • CCND1 expression • KDM6A expression
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GSKJ4
over2years
THE HISTONE DEMETHYLASE KDM6A REGULATES HEMATOPOIETIC STEM AND PROGENITOR CELLS EMERGENCE AND ITS LOSS CAUSES MYELOID-BIASED DIFFERENTIATION IN ZEBRAFISH (EBMT 2022)
 kdm6a is required for HSPCs emergence and lineages differentiation in zebrafish embryos. Our kdm6a-/- zebrafish model will be a helpful tool to understand the process of hematopoiesis.
Epigenetic controller
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RUNX1 (RUNX Family Transcription Factor 1) • KDM6A (Lysine Demethylase 6A) • RAG1 (Recombination Activating 1)
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KDM6A mutation • KDM6A expression
over2years
KDM6 Demethylases Integrate DNA Repair Gene Regulation: Loss of KDM6A Sensitizes AML to PARP Inhibition and Potentiates with BCL2 Blockade (ASH 2021)
In addition, olaparib administration significantly reduced bone marrow engraftment of patient-derived xenografts of KDM6A -mutant primary AML...Using venet responsive isogenic lines we demonstrated that attenuation of KDM6 function increased mitochondrial activity, intracellular ROS levels, de-repressed BCL2 expression, and sensitized AML cells to venetoclax...KDM6s have been implicated in solid tumors, and both PARP and BCL2 inhibitors are being tested in cancer patients, underscoring a wider scope of application. To conclude, KDM6A unfolds to be a central regulator for susceptibility of AML to both PARP and BCL2 inhibition, expanding the possibility to characterize effective combination targeted therapy for AML in clinical settings.
PARP Biomarker • IO biomarker • Epigenetic controller
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FLT3 (Fms-related tyrosine kinase 3) • BCL2 (B-cell CLL/lymphoma 2) • HRD (Homologous Recombination Deficiency) • TET2 (Tet Methylcytosine Dioxygenase 2) • KDM6A (Lysine Demethylase 6A) • BCL2A1 (BCL2 Related Protein A1) • KDM6B (Lysine Demethylase 6B)
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BCL2 expression • KDM6A mutation • BCL2A1 expression • KDM6A expression
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Venclexta (venetoclax) • Lynparza (olaparib)
over2years
Targeting KDM6A suppresses SREBP1c-dependent lipid metabolism and prostate tumorigenesis. (PubMed, Cancer Res)
Collectively, these findings indicate that KDM6A regulates prostate lipid metabolism and is essential for prostate tumorigenesis initiated by PTEN loss. Targeting USP7/KDM6A could be a valuable strategy to ameliorate prostate cancer progression and therapeutic resistance.
Journal
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PTEN (Phosphatase and tensin homolog) • KDM6A (Lysine Demethylase 6A)
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KDM6A expression
over2years
Histone H3K27 demethylase KDM6A is an epigenetic gatekeeper of mTORC1 signalling in cancer. (PubMed, Gut)
KDM6A is an important tumour suppressor in gastrointestinal cancers and acts as an epigenetic toggle for mTORC1 signalling. Patients with KDM6A-deficient tumours could benefit of targeted therapy focusing on mTORC1 inhibition.
Journal • Epigenetic controller
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KDM6A (Lysine Demethylase 6A)
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KDM6A expression
almost3years
Significance of KDM6A mutation in bladder cancer immune escape. (PubMed, BMC Cancer)
Overall, we conclude that KDM6A mutation is frequent in BC and promotes tumour immune escape, which may serve as a novel biomarker to predict the immune response.
Journal
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HER-2 (Human epidermal growth factor receptor 2) • TP53 (Tumor protein P53) • PIK3CA (Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) • FGFR3 (Fibroblast growth factor receptor 3) • ERBB3 (V-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3) • RB1 (RB Transcriptional Corepressor 1) • ARID1A (AT-rich interaction domain 1A) • MUC16 (Mucin 16, Cell Surface Associated) • KDM6A (Lysine Demethylase 6A) • STAG2 (Stromal Antigen 2) • EP300 (E1A binding protein p300) • CSMD3 (CUB And Sushi Multiple Domains 3)
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TP53 mutation • PIK3CA mutation • ERBB3 mutation • KDM6A mutation • STAG2 mutation • KDM6A expression
over3years
Wnt/β-catenin signaling contributes to prostate cancer heterogeneity through reciprocal suppression of H3K27 trimethylation. (PubMed, Biochem Biophys Res Commun)
Compared to GFP cells, GFP cells demonstrated cancer stem cell properties with higher colony formation efficiency, slower cell cycle, higher resistance to docetaxel and higher expression of cancer stem cell markers...H3K27me3 suppressed Wnt/β-catenin signaling by directly silencing LEF1 promoter. Together, our studies suggest that Wnt/β-catenin signaling makes a major contribution to prostate cancer heterogeneity and targeting both Wnt/β-catenin signaling active and inactive populations is essential for developing more effective therapies.
Journal
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KDM6A (Lysine Demethylase 6A)
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KDM6A expression
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docetaxel
over3years
Histone 3 lysine-27 demethylase KDM6A coordinates with KMT2B to play an oncogenic role in NSCLC by regulating H3K4me3. (PubMed, Oncogene)
Interestingly, in NSCLC cell lines, H3K4me3 but not H3K27me2/3 or H3K4me1/2 was markedly altered upon KDM6A or KMT2B knockdown, indicating that KDM6A may act independently of H3K27 demethylases in NSCLC. Taken together, these results indicated that KDM6A or KMT2B may be a prognostic biomarker and promising therapeutic target in NSCLC.
Journal
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KDM6A (Lysine Demethylase 6A)
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KDM6A expression
over3years
Combination of lysine-specific demethylase 6A (KDM6A) and mismatch repair (MMR) status is a potential prognostic factor in colorectal cancer. (PubMed, Cancer Med)
The KDM6A/MMR classification-based subtypes of low KDM6A expression/READ, high KDM6A expression/pMMR, and COAD/pMMR were associated with poor prognosis. This classification can be a novel prognostic approach in CRC.
Journal
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KDM6A (Lysine Demethylase 6A)
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MSI-H/dMMR • KDM6A expression
over3years
Expression of the epigenetic H3K27me3 modifier genes KDM6A and EZH2 in patients with upper tract urothelial carcinoma. (PubMed, Oncol Lett)
In addition, using immunohistochemical analysis, no positive association was found between KDM6A expression and the expression of H3K27me3 or histone-lysine N-methyltransferase EZH2, a histone methyltransferase that generates H3K27me3. The results of the present study indicated that decreased KDM6A expression level was significantly associated with tumor grade and decreased survival time in UTUC, suggesting that KDM6A expression could be used as a prognostic marker in patients with UTUC in China.
Clinical • Journal
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EZH2 (Enhancer of zeste 2 polycomb repressive complex 2 subunit) • KMT2C (Lysine Methyltransferase 2C) • KDM6A (Lysine Demethylase 6A)
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EZH2 positive • KDM6A expression