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BIOMARKER:

EWSR1-WT1 fusion

i
Other names: EWSR1, EWS RNA Binding Protein 1, Ewing Sarcoma Breakpoint Region 1, RNA-Binding Protein EWS, EWS, Ewings Sarcoma EWS-Fli1 (Type 1) Oncogene, Ewing Sarcoma Breakpoint Region 1 Protein, EWS RNA-Binding Protein Variant 6, EWS Oncogene, BK984G1.4, EWS-FLI1, WT1, WT1 Transcription Factor, Wilms Tumor Protein, Wilms Tumor 1, WT33, NPHS4, WIT-2, AWT1, WAGR, GUD
Entrez ID:
9ms
A Study of LY2880070 and Gemcitabine in People With Ewing Sarcoma,Ewing-Like Sarcoma, and Desmoplastic Small Round Cell Tumor (clinicaltrials.gov)
P2, N=24, Recruiting, Memorial Sloan Kettering Cancer Center | Trial completion date: Mar 2024 --> Mar 2025 | Trial primary completion date: Mar 2024 --> Mar 2025
Trial completion date • Trial primary completion date • Combination therapy
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WT1 (WT1 Transcription Factor) • BCOR (BCL6 Corepressor) • EWSR1 (EWS RNA Binding Protein 1) • ETV1 (ETS Variant Transcription Factor 1) • FLI1 (Fli-1 Proto-Oncogene ETS Transcription Factor) • ETV4 (ETS Variant Transcription Factor 4)
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EWSR1-WT1 fusion
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gemcitabine • ESP-01
12ms
Transcriptomic analysis identifies B-lymphocyte kinase as a therapeutic target for desmoplastic small round cell tumor cancer stem cell-like cells. (PubMed, Oncogenesis)
BLK inhibition and knockdown reduced CSC-like properties, including abrogation of tumorsphere formation and stemness marker expression. Importantly, BLK knockdown reduced DSRCT CSC-like cell chemoresistance, making its inhibition a promising target for future combination therapy.
Journal • Cancer stem
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WT1 (WT1 Transcription Factor) • EWSR1 (EWS RNA Binding Protein 1) • SOX2 • NANOG (Nanog Homeobox)
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EWSR1-WT1 fusion
over1year
Desmoplastic small round cell tumor of the liver: diagnosing a rare case on liver biopsy. (PubMed, Diagn Pathol)
It shows the immunohistochemical features of DSRCT and documentation of EWSR1-WT1 fusion.A potential diagnostic pitfall is exerted when evaluating liver biopsy, in which DSRCT is a great mimicker and may be easily confused with more common liver malignancies of childhood, such as hepatoblastoma, calcifying nested stromal-epithelial tumor, undifferentiated embryonal sarcoma, and other small round cell tumors, as well as the fibrolamellar variant of hepatocellular carcinoma. This distinction is critical because an accurate therapeutic approach requires a correct diagnosis.
Journal • Biopsy
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EWSR1 (EWS RNA Binding Protein 1)
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EWSR1-WT1 fusion
over1year
Genomic Breakpoint Characterization and Transcriptome Analysis of Metastatic, Recurrent Desmoplastic Small Round Cell Tumor. (PubMed, Sarcoma)
We further found higher expression of the EWSR1-WT1 upregulated gene set in the recurrent tumor as compared to the primary tumor and lower expression of the EWSR1-WT1 downregulated gene set, suggesting the EWSR1-WT1 fusion continues to play a prominent role in recurrent tumors. The identified pathways including upregulation of DNA repair and downregulation of immune system function may help explain DSRCT's high rate of recurrence and can be utilized to improve the understanding of DSRCT biology and identify novel therapies to both help prevent recurrence and treat recurrent tumors.
Journal • Metastases
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WT1 (WT1 Transcription Factor) • EWSR1 (EWS RNA Binding Protein 1)
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EWSR1-WT1 fusion
2years
Desmoplastic small round cell tumor cancer stem cell-like cells resist chemotherapy but remain dependent on the EWSR1-WT1 oncoprotein. (PubMed, Front Cell Dev Biol)
We further develop the first in vitro DSRCT CSC model which forms tumorspheres, expresses increased levels of stemness markers (SOX2, NANOG, KLF4, and OCT4), and resists doxorubicin chemotherapy treatment. This model is an important addition to the DSRCT tool kit and will enable investigation of this critical DSRCT subpopulation. Despite lower sensitivity to chemotherapy, the DSRCT CSC model remained sensitive to knockdown of the EWSR1-WT1 fusion protein, suggesting that future therapies directed against this oncogenic driver have the potential to treat both DSRCT bulk tumor and CSCs.
Journal
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WT1 (WT1 Transcription Factor) • EWSR1 (EWS RNA Binding Protein 1) • KLF4 (Kruppel-like factor 4) • SOX2 • POU5F1 (POU Class 5 Homeobox 1) • NANOG (Nanog Homeobox)
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EWSR1-WT1 fusion
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doxorubicin hydrochloride
over2years
ANTITUMOR ACTIVITY OF CYTOTOXIC AND TARGETED AGENTS IN A PATIENT-DERIVED XENOGRAFT (PDX) OF DESMOPLASTIC SMALL ROUND CELL TUMOR (DSRCT) HIGHLIGHTS THE IRINOTECAN-TRABECTEDIN COMBINATION (CTOS 2022)
We analyzed the antitumor activity of the following drugs as single-agent: doxorubicin (2.5mg/Kg), pazopanib (100mg/Kg), larotrectenib (50mg/Kg), vinorelbine (5mg/Kg), eribulin (1mg/Kg), irinotecan (2.5mg/Kg) and trabectedin (0.15mg/Kg). Findings of this preclinical study strongly support to further investigate irinotecan in combination with either trabectedin or eribulin in DSRCT. The irinotecan-trabectedin combination appears particularly promising, and deserves to be investigated in prospective clinical studies. We plan to test effectiveness of lurbinectedn, a novel synthetic agent derived from trabectedin with a similar mechanism of action, which is currently under investigation in combination with irinotecan in sarcomas.
Clinical
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WT1 (WT1 Transcription Factor) • EWSR1 (EWS RNA Binding Protein 1)
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EWSR1-WT1 fusion
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doxorubicin hydrochloride • pazopanib • irinotecan • Halaven (eribulin mesylate) • vinorelbine tartrate • Yondelis (trabectedin)
over2years
Multi-site desmoplastic small round cell tumors are genetically related and immune-cold. (PubMed, NPJ Precis Oncol)
Treatment of JN-DSRCT cells with the PI3K inhibitor alpelisib and mTOR inhibitor temsirolimus reduced cell proliferation. In addition, the low mutation burden was associated with an immune-cold state in DSRCT. Together, these data reveal multiple genomic and immune features of DSRCT and suggest therapeutic opportunities in patients.
Journal • Tumor Mutational Burden
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TMB (Tumor Mutational Burden) • ARID1A (AT-rich interaction domain 1A) • WT1 (WT1 Transcription Factor) • EWSR1 (EWS RNA Binding Protein 1)
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ARID1A mutation • TMB-L • EWSR1-WT1 fusion
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Piqray (alpelisib) • Torisel (temsirolimus)
almost3years
Identification, characterization, and targeting of desmoplastic small round cell tumor cancer stem cell-like cells (AACR 2022)
CCK-8 assay demonstrated an increased chemoresistance for tumorspheres versus normal adherent culture especially for doxorubicin, which was confirmed by reduction in PARP cleavage...BLK knockdown reduced CSC-like properties including abrogation of tumorsphere formation and reduction in the levels of SOX2 and NANOG. Together, this work for the first time identifies a CSC-like population in DSRCT and BLK as a potential DSRCT CSC target.
WT1 (WT1 Transcription Factor) • EWSR1 (EWS RNA Binding Protein 1) • SOX2 • FLI1 (Fli-1 Proto-Oncogene ETS Transcription Factor) • NANOG (Nanog Homeobox)
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EWSR1-FLI1 fusion • EWSR1-WT1 fusion
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doxorubicin hydrochloride
3years
EWSR1-WT1 Target Genes and Therapeutic Options Identified in a Novel DSRCT In Vitro Model. (PubMed, Cancers (Basel))
Inhibition of MERTK with the small-molecule inhibitor UNC2025 results in reduced proliferation of DSRCT cells in vitro, suggesting MERTK as a therapeutic target in DSRCT. This study underscores the usefulness of preclinical in vitro models for studying molecular mechanisms and potential therapeutic options.
Preclinical • Journal
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WT1 (WT1 Transcription Factor) • EWSR1 (EWS RNA Binding Protein 1) • MERTK (MER Proto-Oncogene, Tyrosine Kinase)
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EWSR1-WT1 fusion
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UNC2025
3years
Novel patient-derived models of DSRCT enable validation of ERBB signaling as a potential therapeutic vulnerability. (PubMed, Dis Model Mech)
Antagonizing EGFR function with shRNAs, small molecule inhibitors (afatinib, neratinib), or an anti-EGFR antibody (cetuximab) inhibited proliferation of DSRCT cells. Finally, treatment of mice bearing DSRCT xenografts with a combination of cetuximab and afatinib significantly reduced tumor growth. These data provide a rationale for evaluating EGFR antagonists in patients with DSRCT.
Clinical • Journal
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HER-2 (Human epidermal growth factor receptor 2) • WT1 (WT1 Transcription Factor) • EWSR1 (EWS RNA Binding Protein 1)
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EWSR1-WT1 fusion
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Erbitux (cetuximab) • Gilotrif (afatinib) • Nerlynx (neratinib)
3years
CHANCES OF LONG-TERM EVENT-FREE SURVIVAL FOR PATIENTS WITH DESMOPLASTIC SMALL ROUND CELL TUMOR (DSRCT). (CTOS 2021)
All pts underwent a multimodal approach including multiagent chemotherapy (ChT) (anthracyclines +/- alkylating agents +/- vinca alkaloids +/- etoposide +/- cisplatin +/- irinotecan), +/- surgery +/- HIPEC +/- abdominal radiation therapy (RT) +/- high-dose ChT. Although the outcome of pts with DSRCT is clearly unsatisfactory, in our series cure was likely achieved in a subset (16%; 25% in completely resected pts). All our long-term event-free survivors did not have liver/extra-abdominal extension, and all received multiagent ChT and complete surgical resection, while 3/5 had abdominal RT.
Clinical
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EWSR1 (EWS RNA Binding Protein 1)
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EWSR1-WT1 fusion
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cisplatin • etoposide IV • irinotecan
over3years
EWSR1-WT1 gene fusions in neoplasms other than desmoplastic small round cell tumor: a report of three unusual tumors involving the female genital tract and review of the literature. (PubMed, Mod Pathol)
In combination with previous reports, our findings suggest pleiotropy of the EWSR1-WT1 fusion is possible and not limited to DSRCT. Subsets of non-DSRCT EWSR1-WT1 positive tumors may represent discrete entities, but further study is necessary.
Review • Journal
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ER (Estrogen receptor) • WT1 (WT1 Transcription Factor) • EWSR1 (EWS RNA Binding Protein 1) • MME (Membrane Metalloendopeptidase)
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WT1 expression • EWSR1-WT1 fusion • WT1 positive