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BIOMARKER:

Chr del(1p)

12ms
High-risk cytogenetic abnormalities in multiple myeloma: PETHEMA-GEM experience. (PubMed, Hemasphere)
Nevertheless, when co-segregation was eliminated, the detrimental effect of +1q or del(1p) was no longer observed. In conclusion, this study confirms the prognostic significance of high-risk cytogenetic abnormalities in MM and highlights the importance of considering co-occurrence for accurate prognosis assessment.
Journal • IO biomarker
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CD38 (CD38 Molecule)
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Chr t(4;14) • Chr t(14;16) • Chr del(1p)
1year
Selinexor, Daratumumab, Carfilzomib and Dexamethasone for the Treatment of High-Risk, Recurrent or Refractory Multiple Myeloma (clinicaltrials.gov)
P2, N=52, Active, not recruiting, Academic and Community Cancer Research United | Recruiting --> Active, not recruiting
Enrollment closed
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Chr t(4;14) • Chr t(14;16) • Chr del(1p)
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Xpovio (selinexor) • Darzalex (daratumumab) • carfilzomib
over1year
TRIM33 loss in multiple myeloma is associated with genomic instability and sensitivity to PARP inhibitors. (PubMed, Sci Rep)
We show that TRIM33 knockdown sensitizes MM cells to the PARP inhibitor Olaparib, and this is synergistic with the standard of care therapy bortezomib, even in co-culture with bone marrow stromal cells (BMSCs). These findings suggest that TRIM33 loss contributes to the pathogenesis of high-risk MM and that this may be therapeutically exploited through the use of PARP inhibitors.
Journal
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TRIM33 (Tripartite Motif Containing 33)
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Chr del(1p)
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Lynparza (olaparib) • bortezomib
almost2years
Cytogenetic Profile in Monoclonal Gammopathy of Undetermined Significance, Smoldering and Symptomatic Multiple Myeloma: A Study of 1087 Patients with Highly Purified Plasma Cells. (PubMed, Cancers (Basel))
Chromosome 1 structural abnormalities were the most prevalent, found in 65% of cases. The frequent presence of subclones and composite karyotypes underscored the genomic heterogeneity and instability in this cohort.
Journal
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CCND1 (Cyclin D1)
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Chr del(17p) • MYC rearrangement • Chr del(1p)
2years
Whole-Genome Sequencing for Copy Number Abnormalities in Multiple Myeloma Supersedes Karyotype Analysis and Fluorescent in Situ Hybridization (ASH 2023)
ConclusionsLeukoPrint is an automated, convenient and cost-effective approach to depict CNA profile in genomic DNA or cfDNA. This method is superior to conventional approaches when used for CNA testing, and the practice of this method could improve prognostic stratification of MM patients.
Whole genome sequencing
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SDC1 (Syndecan 1)
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Chr del(13)(q14) • Chr del(1p)
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LeukoPrint®
2years
Genome Sequencing to Discover Drivers of Clonal Expansion in Smoldering Multiple Myeloma (ASH 2023)
In addition to well-characterized MM drivers (KRAS, NRAS, etc.), 16 new candidate genes were found significantly mutated, including IKFZ3 (Aiolos), a transcription factor and direct target of degradation with lenalidomide therapy, harboring frameshift and stop-gain mutations in the protein dimerization domain which could affect complete differentiation of plasma cells...Conclusion These results highlight the power of genomic profiling in MM for early detection, discovery of novel drivers, monitoring of clonal selection and transformation to malignant disease. We show SMM is not a simple genomically-mature disorder, but rather a dynamic state with competing subclones, which could be leveraged for therapeutic interventions.
IO biomarker
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KRAS (KRAS proto-oncogene GTPase) • NRAS (Neuroblastoma RAS viral oncogene homolog)
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KRAS mutation • KRAS G12 • NRAS Q61 • KRAS G12S • KRAS G13 • NRAS G13 • KRAS A146 • KRAS Q61 • NRAS A146 • Chr del(1p) • NRAS G12S
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lenalidomide
2years
RADAR Trial: MRD Response Adapted Trial for Newly Diagnosed Transplant Eligible Myeloma Patients (ASH 2023)
Eligible patients receive induction with 4 cycles of RCyBorD (lenalidomide, cyclophosphamide, bortezomib, dexamethasone), followed by high-dose melphalan and stem cell rescue. Patients with high-risk disease receive Isatuximab in addition to RCyBorD during induction...This work is also supported by Core Clinical trials unit infrastructure from Cancer Research UK ( C7852/A25447). The funder of the study had no role in study design, data collection, data analysis, data interpretation or writing of the abstract
Clinical • IO biomarker
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LY9 (Lymphocyte Antigen 9) • SLAMF7 (SLAM Family Member 7)
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Chr del(1p)
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lenalidomide • bortezomib • cyclophosphamide • Sarclisa (isatuximab-irfc) • melphalan
2years
Chromothripsis and Genomic Complexity As Pejorative Prognostic Markers in Pediatric and Adult T-ALL (ASH 2023)
Our study demonstrated that the whole genome analysis of imbalances provides new insights to refine the risk stratification in T-ALL. Notably, genomic complexity (≥ 15 genomic imbalances) and chromothripis demonstrated an association with an inferior outcome in terms of EFS and CIR in pediatric and adult T-ALL.
Clinical
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • RB1 (RB Transcriptional Corepressor 1) • NF1 (Neurofibromin 1) • ETV6 (ETS Variant Transcription Factor 6) • CDKN2B (Cyclin Dependent Kinase Inhibitor 2B) • CREBBP (CREB binding protein) • PTPN2 (Protein Tyrosine Phosphatase Non-Receptor Type 2) • SH2B3 (SH2B Adaptor Protein 3) • CDKN1B (Cyclin dependent kinase inhibitor 1B) • AFDN (Afadin, Adherens Junction Formation Factor) • CASP8AP2 (Caspase 8 Associated Protein 2) • SUZ12 (SUZ12 Polycomb Repressive Complex 2 Subunit) • RPL22 (Ribosomal Protein L22)
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Chr del(13)(q14) • Chr del(1p)
2years
Multiple Myeloma B Cells and Pre-Plasma Cells Are Important Reservoirs for Myeloma Relapse Following Plasma Cell-Directed Therapy and Prevent Cure with Standard Therapies (ASH 2023)
Disease relapse typically occurs regardless of treatment with proteasome inhibitors (such as bortezomib and carfilzomib), immunomodulatory drugs (such as lenalidomide and pomalidomide), anti-CD38 monoclonal antibodies (such as daratumumab and isatuximab) or myeloablative melphalan and autologous stem cell transplantation, and also occurs following treatment with immunotherapeutics such as bispecific antibodies and/or CAR-T cells (targeting BCMA, FcRH5 or GPRC5D). We propose that cure of MM requires eradication of MM progenitor cells alongside plasma cells. We are currently conducting scRNA-seq and CITE-seq studies of primary MM samples to further characterize MM progenitor cells for gene and protein expression in order to define their optimal therapeutic targets.
IO biomarker
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CD20 (Membrane Spanning 4-Domains A1) • SDC1 (Syndecan 1) • IRF4 (Interferon regulatory factor 4)
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Chr del(17p) • Chr del(1p)
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lenalidomide • bortezomib • Darzalex (daratumumab) • carfilzomib • pomalidomide • Sarclisa (isatuximab-irfc) • melphalan
2years
Selinexor, Daratumumab, Carfilzomib and Dexamethasone for the Treatment of High-Risk, Recurrent or Refractory Multiple Myeloma (clinicaltrials.gov)
P2, N=52, Recruiting, Academic and Community Cancer Research United | Trial primary completion date: Dec 2023 --> Sep 2024
Trial primary completion date
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Chr t(4;14) • Chr t(14;16) • Chr del(1p)
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Xpovio (selinexor) • Darzalex (daratumumab) • carfilzomib
2years
Small nucleotide, copy number and structural variants cooperate to hijack driver genes in extramedullary progression of myeloma (IMW 2023)
The MAPK DM, high TMB and persistent genomic instability suggest roles for MAPK-targeted therapies, immunotherapies and DNA damage repair pathway inhibitors, respectively, in EMD. Recurrent codon 61 mutations in RAS suggest a specific role in EMD progression.
Tumor mutational burden • IO biomarker
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KRAS (KRAS proto-oncogene GTPase) • BRAF (B-raf proto-oncogene) • TP53 (Tumor protein P53) • TMB (Tumor Mutational Burden) • NRAS (Neuroblastoma RAS viral oncogene homolog) • FGFR3 (Fibroblast growth factor receptor 3) • CCND2 (Cyclin D2) • CCND3 (Cyclin D3)
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TP53 mutation • BRAF V600E • KRAS mutation • TMB-H • NRAS mutation • BRAF V600 • RAS mutation • NRAS Q61 • KRAS G13 • NRAS G13 • KRAS Q61 • BRAF G469A • NRAS G13R • KRAS A146V • NRAS A146 • Chr del(1p)