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BIOMARKER:

CDKN2A negative

i
Other names: CDKN2A, ARF, CDK4I, CDKN2, CMM2, INK4, INK4a, MLM, MTS1, p14, p14ARF, p16, p16INK4a, p19, p19Arf, Cyclin-dependent kinase inhibitor 2A
Entrez ID:
Related biomarkers:
5d
Reevaluation of negative cervical conizations: Frequency, diagnostic errors, risk factors and management. (PubMed, Pathol Res Pract)
The negative conization rate was 11.9%, with diagnostic errors identified across pre-surgical biopsy, cone specimen, and deeper levels. Risk factors included older age, higher parity, low expression of p16, Ki-67 and geminin (p<0.05). Recurrence represented 8.1% of the negative cones, without identification of statistically significant risk factors. Pathological review with deeper level sections and 2-year follow-up are recommended for patients with negative conizations.
Journal
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GMNN (Geminin DNA replication inhibitor)
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CDKN2A negative
29d
Human Papillomavirus Detection in Scrotal Squamous Cell Carcinoma: Case Series from a Population-Based Cancer Registry. (PubMed, J Registry Manag)
The verrucous (warty) SCC subtype case was HPV6-positive and p16-negative. The presence of HPV16 and p16 overexpression in the examined tissue specimens lends additional support for the role of HPV in the etiology of scrotal SCC.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A negative
1m
EGFR overexpression and macrophage infiltration correlate with poorer prognosis in HPV-negative oropharyngeal cancer via STAT6 signaling. (PubMed, Head Neck)
There is strong correlation between EGFR overexpression and M2 polarization in patients with p16-negative OPC. Immunotherapy with or without EGFR inhibitor could be considered in these high-risk patients.
Journal • IO biomarker
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EGFR (Epidermal growth factor receptor) • STAT6 (Signal transducer and activator of transcription 6) • MRC1 (Mannose Receptor C-Type 1)
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EGFR overexpression • EGFR positive • CDKN2A negative • MRC1 expression
1m
Enrollment change • Surgery • Post-surgery
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CD4 (CD4 Molecule)
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CDKN2A negative
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Keytruda (pembrolizumab) • IO102-IO103
1m
Trial initiation date
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TNFA (Tumor Necrosis Factor-Alpha)
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CDKN2A negative
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cisplatin • carboplatin • xevinapant (Debio 1143)
1m
A Case Report of Metastatic Breast Cancer with Peritoneal Metastasis and Massive Ascites Responding to CDK4/6 Inhibitor(Palbociclib) (PubMed, Gan To Kagaku Ryoho)
The large amount of ascites decreased after the start of administration of fulvestrant and CDK4/6 inhibitor(PAL). Fifty months later, she continues to do good ADL and PR status. We experienced a case of metastatic breast cancer with massive ascites and peritoneal metastasis that was successfully treated with a CDK4/6 inhibitor(PAL)and achieved long- term survival.
Journal • Metastases
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CCND1 (Cyclin D1)
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CCND1 overexpression • CDKN2A negative • CCND1 expression
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Ibrance (palbociclib) • fulvestrant
1m
Human papillomavirus (HPV) load is higher in HPVDNA/p16 positive than in HPVDNA positive/p16 negative oropharyngeal squamous cell carcinoma but does not differ significantly between various subsites or correlate to survival. (PubMed, Oral Oncol)
To conclude, the mean viral load in HPVDNA+/p16+ OPSCC was higher than in HPVDNA+/p16- OPSCC, but there was no statistically significant difference in viral load depending on OPSCC subsite or on clinical outcome.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A negative • CDKN2A overexpression
2ms
The evolution of premalignant lesions in the upper aerodigestive tract (ETHNC 2024)
SPINK5, a known tumour suppressor gene in HNSCC, was already downregulated in low-grade dysplastic lesions, indicating an early deactivation in the evolution of the disease. Genomic alterations as well as aberrant immune gene expression can be observed early on in the evolution of tumours of the upper aerodigestive tract, highlighting the potential for targeting early mechanisms of disease progression.
TP53 (Tumor protein P53) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • NOTCH1 (Notch 1) • NOTCH3 (Notch Receptor 3)
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TP53 mutation • CDKN2A negative • NOTCH3 mutation
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nCounter® PanCancer Immune Profiling Panel
2ms
Prognosis of immunotherapy for non-small cell lung cancer with CDKN2A loss of function. (PubMed, J Thorac Dis)
Our study revealed that CDKN2A LOF NSCLC patients treated with immune checkpoint inhibitor (ICI) mono-therapy or combined therapy had a worse prognosis than those with CDKN2A wild-type NSCLC. However, our study also suggested that ICI could work quite effectively in selective CDKN2A LOF patients.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A negative
2ms
Expression of EGFR and p16 in Squamous Cell Carcinoma of External Auditory Canal. (PubMed, Kobe J Med Sci)
In the patients with T3 & T4a EACSCC, prognosis of the patients with positive p16 expression EACSCC tended to be better than those with negative p16 expression. These results suggest the clinical significance of EGFR and p16 expressions in the patients with advanced EACSCC to predict oncological outcomes.
Journal
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EGFR (Epidermal growth factor receptor)
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EGFR expression • EGFR negative • CDKN2A negative
2ms
KEYNOTE-E40: Phase II Trial of Neoadjuvant and Adjuvant IO102-IO103 and Pembrolizumab KEYTRUDA® in Patients With Resectable Tumors (clinicaltrials.gov)
P2, N=30, Recruiting, IO Biotech | Trial completion date: Aug 2028 --> Jan 2027 | Trial primary completion date: Sep 2025 --> Apr 2025
Trial completion date • Trial primary completion date • Surgery • Post-surgery
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CD4 (CD4 Molecule)
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CDKN2A negative
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Keytruda (pembrolizumab) • IO102-IO103
2ms
Programmed Death-Ligand 1 (PD-L1) Expression in Penile Squamous Cell Carcinoma - A Comparative Assessment of the Reference Clone 22C3 with SP263 and E1L3N Clones along with a Correlation of Clinicopathologic and Survival Parameters (USCAP 2024)
1. Ours is the first study to demonstrate that SP263 and E3L1N can reliably be used to evaluate PD-L1 in PCs as there is good concordance with the reference clone 22C3. 2.
Clinical • PD(L)-1 Biomarker • IO biomarker
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PD-L1 (Programmed death ligand 1)
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PD-L1 expression • PD-L1 overexpression • PD-L1 underexpression • PD-L1 negative • CDKN2A negative • PD-L1-L
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PD-L1 IHC 22C3 pharmDx • VENTANA PD-L1 (SP263) Assay
2ms
Pembrolizumab Plus Olaparib in LA-HNSCC (clinicaltrials.gov)
P2, N=45, Recruiting, UNC Lineberger Comprehensive Cancer Center | Trial completion date: Oct 2025 --> Oct 2026 | Trial primary completion date: Oct 2024 --> Oct 2025
Trial completion date • Trial primary completion date • Metastases
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CDKN2A negative
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Keytruda (pembrolizumab) • Lynparza (olaparib) • cisplatin
2ms
BD4QoL: Big Data for Quality of Life in Head and Neck Cancer (clinicaltrials.gov)
P=N/A, N=420, Recruiting, Fondazione IRCCS Istituto Nazionale dei Tumori, Milano | Trial completion date: Jan 2025 --> Jun 2025 | Trial primary completion date: Apr 2024 --> Sep 2024
Trial completion date • Trial primary completion date • HEOR
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CDKN2A negative
2ms
Retrospective data • Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A negative
2ms
Tumor volume and cancer stem cell expression as prognostic markers for high-dose loco-regional failure in head and neck squamous cell carcinoma - a DAHANCA 19 study. (PubMed, Radiother Oncol)
Tumor volume, p16, and CSC markers are potential biomarkers for HDF for patients with HNSCC treated with (C-)RT. Lower expression of CSC in p16+ OPSCC may contribute to better tumor control.
Journal • Cancer stem
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CD44 (CD44 Molecule) • SLC3A2 (Solute Carrier Family 3 Member 2)
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CDKN2A negative • CD44 expression
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Nimoral (nimorazole)
3ms
Study of Xevinapant With Radiation and Chemotherapy for Patients With Head and Neck Cancer (clinicaltrials.gov)
P1, N=42, Not yet recruiting, University of Chicago | Trial primary completion date: Nov 2025 --> Oct 2027
Trial primary completion date • Metastases
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CDKN2A negative
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cisplatin • carboplatin • paclitaxel • xevinapant (Debio 1143)
3ms
TIRACAN: Open Label Phase 2 Basket Trial With Atezolizumab and Tiragolumab in Solid Tumors (clinicaltrials.gov)
P2, N=97, Recruiting, University Medical Center Groningen | Not yet recruiting --> Recruiting
Enrollment open • Pan tumor
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CD8 (cluster of differentiation 8)
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CDKN2A negative
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Tecentriq (atezolizumab) • tiragolumab (RG6058)
4ms
Enrollment change • Trial withdrawal • Combination therapy • Oncolytic virus • Metastases
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PD-L1 (Programmed death ligand 1)
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CDKN2A negative
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Opdivo (nivolumab) • carboplatin • paclitaxel • RP3
4ms
INTELHOPE: Dose Escalation Versus Standard in Laryngopharyngeal Cancers (clinicaltrials.gov)
P=N/A, N=100, Completed, Tata Medical Center | Recruiting --> Completed | Phase classification: P1/2 --> PN/A
Trial completion • Phase classification • Metastases
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CDKN2A negative
4ms
Immunophenotypic p14 and p16 correlations with CDKN2A mutations in primary multiple and familial melanoma: An observational study. (PubMed, Medicine (Baltimore))
This analysis highlighted the value of singular p16 immunohistochemical absence as a predictor for aggressive biological behavior and unfavorable prognosis in familial melanoma and/or MPM, in comparison with the exclusive loss of p14, indifferent to the histopathological subtype. The present study emphasizes the utility of immunohistochemistry as a less expensive method of complementing the current testing arsenal and could represent the starting point for the elaboration of tailored diagnostic and therapeutic algorithms, based on the discovered p14-p16-CDKN2A significant correlation.
Observational data • Retrospective data • Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A deletion • CDKN2A mutation • CDKN2A negative
4ms
PD 0332991 and Cetuximab in Patients With Incurable SCCHN (clinicaltrials.gov)
P1/2, N=96, Completed, Washington University School of Medicine | Active, not recruiting --> Completed | Trial completion date: Oct 2024 --> Nov 2023
Trial completion • Trial completion date
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CDKN2A negative
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Erbitux (cetuximab) • Ibrance (palbociclib)
4ms
FISH analysis reveals CDKN2A and IFNA14 co-deletion is heterogeneous and is a prominent feature of glioblastoma. (PubMed, Brain Tumor Pathol)
Furthermore, wt (intact) CDKN2A/IFNA14 were found to be associated with longer survival in recurrent GBMs. Our data suggest that co-deletion of CDKN2A/IFNA14 in GBM negatively correlates with survival and CDKN2A-wt status correlated with longer survival, and with second surgery, itself a marker for improved patient outcomes.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A deletion • CDKN2A negative
4ms
Enrollment open
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CD4 (CD4 Molecule)
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CDKN2A negative
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Keytruda (pembrolizumab) • IO102-IO103
4ms
NDURE2: Navigation vs Usual Care for Timely Adjuvant Therapy for Patients With Locally Advanced HNSCC (clinicaltrials.gov)
P=N/A, N=177, Active, not recruiting, Medical University of South Carolina | Recruiting --> Active, not recruiting
Enrollment closed • Metastases
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CDKN2A negative
5ms
Altered p53/p16 expression is linked to urothelial carcinoma progression but largely unrelated to prognosis in muscle-invasive tumors. (PubMed, Acta Oncol)
Aberrant p53 and p16 immunostaining increases during grade and stage progression although p53 negative and p16 positive immunostaining lack prognostic significance in pT2-4 carcinomas. Potential diagnostic features are that high level p16 expression is limited to neoplastic urothelium and p53 null phenotype to aggressive cancers (grade 3 and invasive).
Journal
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TP53 (Tumor protein P53)
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TP53 mutation • CDKN2A negative
5ms
Trial initiation date
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CDKN2A negative
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TTI-101 oral
5ms
A Phase I Study of the CDK4/6 Inhibitor, Palbociclib in Combination with Cetuximab and Radiotherapy (IMRT) for Locally Advanced Head and Neck Squamous Cell Carcinoma. (PubMed, Clin Cancer Res)
The palbociclib, cetuximab and IMRT combination was well-tolerated. The RP2D was established, while no MTD was determined. The regimen demonstrated promising preliminary efficacy, suggesting further investigation is warranted in cisplatin-ineligible p16/HPV-unrelated LA-HNSCC patients.
P1 data • Journal • Combination therapy • Metastases
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EGFR (Epidermal growth factor receptor) • TP53 (Tumor protein P53) • PIK3CA (Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) • GNAQ (G Protein Subunit Alpha Q) • CCND1 (Cyclin D1) • CCND2 (Cyclin D2)
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TP53 mutation • PIK3CA mutation • EGFR expression • CDKN2A negative
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Erbitux (cetuximab) • Ibrance (palbociclib)
5ms
The transcription activity of OTX2 on p16 expression is significantly blocked by methylation of CpG shore in non-promoter of lung cancer cell lines. (PubMed, Transl Cancer Res)
The verification results with TCGA and LUAD patients' samples supported that the p16 Cgi shore is a key methylation regulatory region. Our findings suggested that methylation of the Cgi shore in the p16 non-promoter region can hamper the transcriptional activity of OTX2, leading to a reduction in the expression of p16, which might contribute to the development of lung cancer.
Preclinical • Journal
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YY1 (YY1 Transcription Factor)
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CDKN2A negative
5ms
The Spectrum of HPV-independent Penile Intraepithelial Neoplasia: A Proposal for Subclassification. (PubMed, Am J Surg Pathol)
Four histologically different HPV-independent penile precursor lesions can be assigned to 2 major genetic/biological pathways with characteristic highly differentiated precursors requiring different clinical management decisions. These include d-PeIN in chronic inflammatory dermatoses, with p53 overexpression and TP53/CDKN2A mutations, and the p53 wild-type verrucous and verruciform precursors unassociated with dermatoses, but with mutations in oncogenes PIK3CA and HRAS.
Journal
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TP53 (Tumor protein P53) • PIK3CA (Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) • HRAS (Harvey rat sarcoma viral oncogene homolog) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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TP53 mutation • PIK3CA mutation • TP53 wild-type • CDKN2A mutation • HRAS mutation • CDKN2A negative • CDKN2A overexpression • TP53 overexpression
5ms
Molecular markers associated with survival in grade 3 meningioma (SNO 2023)
The associations between reduced OS and TERTp mutations and CDKN2A/B status remained significant after adjusting for Simpson resection grade. Our findings support using TERTp mutations and CDKN2A/B status for prognostication in grade 3 meningioma.
CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • TERT (Telomerase Reverse Transcriptase) • MTAP (Methylthioadenosine Phosphorylase) • BAP1 (BRCA1 Associated Protein 1) • CDKN2B (Cyclin Dependent Kinase Inhibitor 2B)
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CDKN2A deletion • CDKN2A mutation • BAP1 mutation • CDKN2A negative • TERT mutation • MTAP negative
5ms
PD 0332991 and Cetuximab in Patients With Incurable SCCHN (clinicaltrials.gov)
P1/2, N=96, Active, not recruiting, Washington University School of Medicine | Trial completion date: Apr 2025 --> Oct 2024
Trial completion date
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CDKN2A negative
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Erbitux (cetuximab) • Ibrance (palbociclib)
6ms
Prevalence of P16 Immunohistochemistry Positive Staining and Its Correlation to Clinical and Radiological Staging of Squamous Cell Carcinoma of the Cervix. (PubMed, J Obstet Gynaecol India)
There is a positive significant correlation between early resectable stage in relation to positive P16 immunostaining, and the same was present between late nonresectable stage and negative P16 immunostaining (p = 0.000). The present study concluded that P16 positive immunostaining prevalence in cervical squamous cell carcinoma was 56.7% and its positive staining is highly correlated with early resectable clinically and radiologically disease stage.
Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
|
CDKN2A negative
6ms
Clinical Validation of CDKN2A/B Deletions Using the TruSight Oncology 500 Assay (AMP 2023)
CDKN2A deletion can be reliably detected with the TruSight Oncology 500 hybridization-capturebased platform and can be clinically validated through concordance analysis with an orthogonal testing platform. Further evaluation of the concordance of FISH-detected locus deletion homozygosity versus heterozygosity to copy number threshold is currently being evaluated.
Clinical
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IDH1 (Isocitrate dehydrogenase (NADP(+)) 1) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CDK4 (Cyclin-dependent kinase 4) • CDKN2B (Cyclin Dependent Kinase Inhibitor 2B) • CDK6 (Cyclin-dependent kinase 6)
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IDH1 mutation • CDKN2A deletion • CDKN2A negative
|
TruSight Oncology 500 Assay
6ms
p16 expression in urothelial carcinoma: Experience from a tertiary care center in coastal South India. (PubMed, J Cancer Res Ther)
The p16 was absent in all non-neoplastic and precursor lesions. Thus, it can provide essential information not only about HPV association but also on the prognostic implications for the patients.
Retrospective data • Journal
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CDKN2A (Cyclin Dependent Kinase Inhibitor 2A)
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CDKN2A negative
6ms
ENDURE: Multi-Site Trial of Navigation vs Treatment as Usual for Delays in Starting Adjuvant Therapy (clinicaltrials.gov)
P=N/A, N=532, Recruiting, Medical University of South Carolina | Not yet recruiting --> Recruiting
Enrollment open
|
CDKN2A negative
6ms
New P1 trial • Metastases
|
CDKN2A negative
|
cisplatin • carboplatin • paclitaxel • xevinapant (Debio 1143)
6ms
Trial initiation date • Combination therapy • Oncolytic virus • Metastases
|
PD-L1 (Programmed death ligand 1)
|
CDKN2A negative
|
Opdivo (nivolumab) • carboplatin • paclitaxel • RP3
6ms
PROGNOSTIC FACTORS AND CLINICAL OUTCOMES IN PATIENTS WITH VULVAR CANCER: A 15-YEAR RETROSPECTIVE STUDY (IGCS 2023)
Of 104 vulvar cancer patients, prognostic factors that significantly correlated with worsening PFS were coexisting vulvar lesions, such as sclerosis and extramammary Paget's disease (p=0.008), positive lymphovascular invasion (LVSI) (p=0.011), positive pelvic or paraaortic node metastases (p=0.042), and positive p53 status (p=0.046). Tumor size over 4 cm in diameter was significantly associated with worsening OS (p=0.001). The median PFS was 26.3 months, and the median OS was 44.7 months.
Clinical data • Retrospective data
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PD-L1 (Programmed death ligand 1) • TP53 (Tumor protein P53)
|
CDKN2A negative
6ms
Phase II Trial of Neoadjuvant and Adjuvant IO102-IO103 and Pembrolizumab in Patients With Resectable Tumors (clinicaltrials.gov)
P2, N=30, Not yet recruiting, IO Biotech | N=60 --> 30 | Trial completion date: Mar 2029 --> Aug 2028 | Trial primary completion date: Feb 2025 --> Sep 2025
Enrollment change • Trial completion date • Trial primary completion date • Surgery • Post-surgery
|
CD4 (CD4 Molecule)
|
CDKN2A negative
|
Keytruda (pembrolizumab) • IO102-IO103
6ms
TRYHARD: Radiation Therapy Plus Cisplatin With or Without Lapatinib in Treating Patients With Head and Neck Cancer. (clinicaltrials.gov)
P2, N=142, Completed, Radiation Therapy Oncology Group | Active, not recruiting --> Completed
Trial completion • Metastases
|
EGFR (Epidermal growth factor receptor) • HER-2 (Human epidermal growth factor receptor 2)
|
CDKN2A negative
|
cisplatin • lapatinib