^
8ms
Establishment and characterization of multiple patient-derived organoids from a case of advanced endometrial cancer. (PubMed, Hum Cell)
Lastly, a drug screening identified four candidate reagents commonly effective to all PDOs. Collectively, we showed that multiple PDOs could help reproduce the spatial diversity of a tumor and serve as a valuable resource in UCS research in many respects.
Journal • Metastases
|
KRAS (KRAS proto-oncogene GTPase) • TP53 (Tumor protein P53) • STK11 (Serine/threonine kinase 11) • CCNE1 (Cyclin E1)
|
TP53 mutation • KRAS mutation • HER-2 amplification • HER-2 mutation • HER-2 expression • STK11 mutation • CCNE1 amplification • CCNE1 mutation
12ms
The genomic and immune landscapes of gastric cancer and their correlations with HER2 amplification and PD-L1 expression. (PubMed, Cancer Med)
The combination of HER2 amplification and PD-L1 expression in Chinese patients with GC could stratify the total populations into several subgroups with distinctive genomic and immune landscapes, which should be considered when making personalized treatment decisions.
Journal • MSi-H Biomarker • PD(L)-1 Biomarker • IO biomarker
|
HER-2 (Human epidermal growth factor receptor 2) • PD-L1 (Programmed death ligand 1) • KRAS (KRAS proto-oncogene GTPase) • TP53 (Tumor protein P53) • PIK3CA (Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) • MSI (Microsatellite instability) • MYC (V-myc avian myelocytomatosis viral oncogene homolog) • ARID1A (AT-rich interaction domain 1A) • CCNE1 (Cyclin E1) • KMT2D (Lysine Methyltransferase 2D) • CDH1 (Cadherin 1)
|
PD-L1 expression • TP53 mutation • KRAS mutation • TMB-H • MSI-H/dMMR • HER-2 overexpression • HER-2 amplification • PIK3CA mutation • HER-2 expression • ARID1A mutation • MYC amplification • PD-L1 amplification • HER-2 amplification + PD-L1 expression • CCNE1 mutation
12ms
Testing the Combination of Two Anti-cancer Drugs, Peposertib (M3814) and M1774 for Advanced Solid Tumors (clinicaltrials.gov)
P1, N=66, Recruiting, National Cancer Institute (NCI) | Phase classification: P1b --> P1 | Initiation date: Nov 2023 --> Feb 2024
Phase classification • Trial initiation date
|
ATM (ATM serine/threonine kinase) • ARID1A (AT-rich interaction domain 1A) • CCNE1 (Cyclin E1) • PBRM1 (Polybromo 1) • FBXW7 (F-Box And WD Repeat Domain Containing 7) • ATRX (ATRX Chromatin Remodeler) • ARID1B (AT-Rich Interaction Domain 1B) • ARID2 (AT-Rich Interaction Domain 2) • SMARCA2 (SWI/SNF Related, Matrix Associated, Actin Dependent Regulator Of Chromatin, Subfamily A, Member 2) • SS18 (SS18 Subunit Of BAF Chromatin Remodeling Complex)
|
ATM mutation • ARID1A mutation • CCNE1 amplification • PBRM1 mutation • CCNE1 mutation
|
peposertib (M3814) • tuvusertib (M1774)
1year
Cell Cycle Regulators Across Solid Tumors (AMP 2023)
Across solid tumors, alterations associated with sensitivity to CDK4/6 inhibitors varied widely in frequency. Though the frequency of alterations in CDK4/6 inhibitor resistance genes was generally low, identifying such patients may be critical for decisions regarding the use of CDK4/6 inhibitors.
Tumor mutational burden
|
EGFR (Epidermal growth factor receptor) • HER-2 (Human epidermal growth factor receptor 2) • KRAS (KRAS proto-oncogene GTPase) • TP53 (Tumor protein P53) • PIK3CA (Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) • TMB (Tumor Mutational Burden) • PTEN (Phosphatase and tensin homolog) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • RB1 (RB Transcriptional Corepressor 1) • ARID1A (AT-rich interaction domain 1A) • CCND1 (Cyclin D1) • CCNE1 (Cyclin E1) • MTAP (Methylthioadenosine Phosphorylase) • CDKN2B (Cyclin Dependent Kinase Inhibitor 2B) • FGF3 (Fibroblast growth factor 3)
|
TMB-H • HER-2 negative • CCNE1 mutation
|
OncoExTra™ test
1year
Testing the Combination of Two Anti-cancer Drugs, Peposertib (M3814) and M1774 for Advanced Solid Tumors (clinicaltrials.gov)
P1b, N=66, Recruiting, National Cancer Institute (NCI) | Suspended --> Recruiting | Initiation date: May 2023 --> Nov 2023
Enrollment open • Trial initiation date • Combination therapy • Metastases
|
ATM (ATM serine/threonine kinase) • ARID1A (AT-rich interaction domain 1A) • CCNE1 (Cyclin E1) • PBRM1 (Polybromo 1) • FBXW7 (F-Box And WD Repeat Domain Containing 7) • ATRX (ATRX Chromatin Remodeler) • ARID1B (AT-Rich Interaction Domain 1B) • ARID2 (AT-Rich Interaction Domain 2) • SMARCA2 (SWI/SNF Related, Matrix Associated, Actin Dependent Regulator Of Chromatin, Subfamily A, Member 2) • SS18 (SS18 Subunit Of BAF Chromatin Remodeling Complex)
|
ATM mutation • ARID1A mutation • CCNE1 amplification • PBRM1 mutation • CCNE1 mutation
|
peposertib (M3814) • tuvusertib (M1774)
over1year
Homologous recombination deficiency (HRD) testing on ovarian cancer ascites: A feasibility study (ESMO 2023)
Conclusions This exploratory study showed that HRD testing on cytological specimens from EOC ascites is feasible but standardized pre-analytical procedures are required to ensure adequate samples for the analysis. Ascites might represent a valid alternative for early BRCA1/2 and HRD status evaluation in women with EOC when tissue samples are inadequate/insufficient.
BRCA Biomarker
|
BRCA1 (Breast cancer 1, early onset) • BRCA2 (Breast cancer 2, early onset) • HRD (Homologous Recombination Deficiency) • CCNE1 (Cyclin E1) • BRCA (Breast cancer early onset)
|
TP53 mutation • HRD • BRCA wild-type • CCNE1 mutation
|
SOPHiA DDM HRD Solution
over1year
Testing the Combination of Two Anti-cancer Drugs, Peposertib (M3814) and M1774 for Advanced Solid Tumors (clinicaltrials.gov)
P1b, N=66, Suspended, National Cancer Institute (NCI) | Not yet recruiting --> Suspended
Trial suspension • Combination therapy • Metastases
|
ATM (ATM serine/threonine kinase) • ARID1A (AT-rich interaction domain 1A) • CCNE1 (Cyclin E1) • PBRM1 (Polybromo 1) • FBXW7 (F-Box And WD Repeat Domain Containing 7) • ATRX (ATRX Chromatin Remodeler) • ARID1B (AT-Rich Interaction Domain 1B) • ARID2 (AT-Rich Interaction Domain 2) • SMARCA2 (SWI/SNF Related, Matrix Associated, Actin Dependent Regulator Of Chromatin, Subfamily A, Member 2) • SS18 (SS18 Subunit Of BAF Chromatin Remodeling Complex)
|
ATM mutation • ARID1A mutation • CCNE1 amplification • PBRM1 mutation • CCNE1 mutation
|
peposertib (M3814) • tuvusertib (M1774)
over1year
Mesonephric-like Adenocarcinoma of the Female Genital Tract: Novel Observations and Detailed Molecular Characterisation of Mixed Tumours and Mesonephric-like Carcinosarcomas. (PubMed, Histopathology)
Our observations provide additional evidence that MLAs have a Müllerian origin and characterise mesonephric-like carcinosarcomas in which chondroid elements appear to be characteristic. In reporting these findings, we provide recommendations for distinction between a mesonephric-like carcinosarcoma and a MLA with a spindle cell component.
Journal
|
EGFR (Epidermal growth factor receptor) • KRAS (KRAS proto-oncogene GTPase) • PTEN (Phosphatase and tensin homolog) • CCNE1 (Cyclin E1) • CREBBP (CREB binding protein)
|
KRAS mutation • EGFR mutation • PTEN mutation • CCNE1 mutation
over1year
Clinical implications of tumor-based next-generation sequencing in high-grade epithelial ovarian cancer. (PubMed, Cancer)
Although more and more patients with ovarian cancer are undergoing tumor-based next-generation sequencing to identify genetic mutations in their tumors, the benefits of such testing are not well established. In a group of over 400 patients with ovarian cancer who underwent tumor-based next-generation sequencing in the course of their treatment, nearly all patients had one or more genetic alterations detected, and one out of four patients had a mutation that qualified them for a personalized treatment option.
Retrospective data • Journal • Next-generation sequencing • BRCA Biomarker
|
TP53 (Tumor protein P53) • PIK3CA (Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) • BRCA1 (Breast cancer 1, early onset) • BRCA2 (Breast cancer 2, early onset) • NF1 (Neurofibromin 1) • CCNE1 (Cyclin E1) • AKT2 (V-akt murine thymoma viral oncogene homolog 2)
|
TP53 mutation • BRCA2 mutation • BRCA1 mutation • PIK3CA mutation • NF1 mutation • CCNE1 amplification • BRCA1 mutation + BRCA2 mutation • AKT2 amplification • CCNE1 mutation
over1year
CCNE1 amplification in high-grade serous ovarian cancer: analysis of the GENIE database (AACR 2023)
Somatic sequencing is warranted to identify patients of this subset of HGSOC, and understanding the co-amplifications and co-mutations is essential so that they are targeted for optimal survival outcomes.
BRCA Biomarker
|
HER-2 (Human epidermal growth factor receptor 2) • KRAS (KRAS proto-oncogene GTPase) • TP53 (Tumor protein P53) • PIK3CA (Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) • BRCA1 (Breast cancer 1, early onset) • BRCA2 (Breast cancer 2, early onset) • PTEN (Phosphatase and tensin homolog) • RB1 (RB Transcriptional Corepressor 1) • NF1 (Neurofibromin 1) • CCNE1 (Cyclin E1) • KMT2D (Lysine Methyltransferase 2D) • CDK12 (Cyclin dependent kinase 12) • TSC2 (TSC complex subunit 2) • AKT2 (V-akt murine thymoma viral oncogene homolog 2) • BRD4 (Bromodomain Containing 4)
|
TP53 mutation • KRAS mutation • PIK3CA mutation • PTEN mutation • CCNE1 amplification • KMT2D mutation • TSC2 mutation • CCNE1 mutation
over1year
Establishment and characterization of a panel of breast XPDX models representing innate or acquired resistance to trastuzumab deruxtecan (T-DXd) (AACR 2023)
These models, designated ST4565C, ST4565D, STM148B, STM148C, STM148D, and ST4480B/EHR were developed and characterized for receptor expression, genomics, and drug sensitivities toward chemotherapies and targeted agents including T-DXd, T-DM1, and margetuximab. ST4565C/D was established from a patient with ER+/HER2+, metastatic BC who was T-DXd treatment naïve. ST4565C was collected post chemo- and HER2-targeted therapies; ST4565D was collected following eribulin/margetuximab... We established and characterized six breast XPDX models representing innate or acquired resistance to T-DXd. These models are valuable tools in understanding resistance mechanisms and in developing novel therapies for T-DXd-resistant patients.
Preclinical
|
ER (Estrogen receptor) • PIK3CA (Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) • FGFR1 (Fibroblast growth factor receptor 1) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • CCND1 (Cyclin D1) • CCNE1 (Cyclin E1) • MTAP (Methylthioadenosine Phosphorylase) • CDKN2B (Cyclin Dependent Kinase Inhibitor 2B) • NOTCH3 (Notch Receptor 3) • RICTOR (RPTOR Independent Companion Of MTOR Complex 2) • CCDC170(Coiled-Coil Domain Containing 170)
|
PIK3CA mutation • PIK3CA E545K • CDKN2A deletion • FGFR1 fusion • FGFR1 expression • CCND1 expression • PIK3CA E545 • ER-CCDC170 fusion • CCNE1 mutation
|
Kadcyla (ado-trastuzumab emtansine) • Enhertu (fam-trastuzumab deruxtecan-nxki) • Halaven (eribulin mesylate) • Margenza (margetuximab-cmkb)
almost2years
New P1 trial • Combination therapy • Metastases
|
ATM (ATM serine/threonine kinase) • ARID1A (AT-rich interaction domain 1A) • CCNE1 (Cyclin E1) • PBRM1 (Polybromo 1) • FBXW7 (F-Box And WD Repeat Domain Containing 7) • ATRX (ATRX Chromatin Remodeler) • ARID1B (AT-Rich Interaction Domain 1B) • ARID2 (AT-Rich Interaction Domain 2) • SMARCA2 (SWI/SNF Related, Matrix Associated, Actin Dependent Regulator Of Chromatin, Subfamily A, Member 2) • SS18 (SS18 Subunit Of BAF Chromatin Remodeling Complex)
|
ATM mutation • ARID1A mutation • CCNE1 amplification • PBRM1 mutation • CCNE1 mutation
|
peposertib (M3814) • tuvusertib (M1774)
almost2years
Homologous Recombination Deficiency and Cyclin E1 Amplification Are Correlated with Immune Cell Infiltration and Survival in High-Grade Serous Ovarian Cancer. (PubMed, Cancers (Basel))
Molecular profiles and TME are associated with OS. TME differs per profile, with higher immune cell densities showing a favorable OS, even within the profiles. HGSOC does not reflect one entity but comprises different entities based on molecular profiles and TME.
Journal • BRCA Biomarker
|
BRCA1 (Breast cancer 1, early onset) • BRCA2 (Breast cancer 2, early onset) • HRD (Homologous Recombination Deficiency) • CD20 (Membrane Spanning 4-Domains A1) • CD8 (cluster of differentiation 8) • CCNE1 (Cyclin E1) • BRCA (Breast cancer early onset) • ITGAE (Integrin Subunit Alpha E)
|
BRCA2 mutation • BRCA1 mutation • HRD • CCNE1 amplification • CCNE1 mutation
2years
Malignant Undifferentiated Epithelioid Neoplasms with MAML2 rearrangements: a Clinicopathologic Study of Six Cases Demonstrating a Heterogenous Entity. (PubMed, Genes Chromosomes Cancer)
Of the 4 cases with detailed clinical history (median follow-up period 8 months), 3 developed distant metastatic disease (one of which died of disease); one case remained free of disease 3?years following surgical excision. In conclusion, we describe a heterogeneous series of MAML2-rearranged undifferentiated malignant epithelioid neoplasms, a small subset of which may overlap with a recently described MIFS variant with YAP1::MAML2 fusions, further expanding the clinicopathologic spectrum of mesenchymal neoplasms with recurrent MAML2 gene rearrangements.
Journal
|
TP53 (Tumor protein P53) • PTEN (Phosphatase and tensin homolog) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • RB1 (RB Transcriptional Corepressor 1) • CCNE1 (Cyclin E1) • PDGFRB (Platelet Derived Growth Factor Receptor Beta) • CDKN2B (Cyclin Dependent Kinase Inhibitor 2B) • YAP1 (Yes associated protein 1) • RBMS3 (RNA Binding Motif Single Stranded Interacting Protein 3) • ARHGAP42 (Rho GTPase Activating Protein 42) • MAML2 (Mastermind Like Transcriptional Coactivator 2)
|
TP53 mutation • PTEN mutation • CDKN2A deletion • CCNE1 amplification • RB1 mutation • CCNE1 mutation • PDGFRB mutation
2years
COMPREHENSIVE PROFILING OF CERVIX CANCER PATIENTS USING TUMOR NEXTGENERATION SEQUENCING (NGS) AND IMMUNOHISTOCHEMISTRY (IHC) (IGCS 2022)
For patients with cervical cancer, tumor NGS and IHC profile may help identify potential candidate for targeted therapy and immunotherapy.
Clinical • PD(L)-1 Biomarker • IO biomarker • Next-generation sequencing
|
TP53 (Tumor protein P53) • PIK3CA (Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) • PTEN (Phosphatase and tensin homolog) • CCNE1 (Cyclin E1) • FBXW7 (F-Box And WD Repeat Domain Containing 7) • FAT1 (FAT atypical cadherin 1) • PIK3R1 (Phosphoinositide-3-Kinase Regulatory Subunit 1)
|
PD-L1 expression • PTEN mutation • CCNE1 amplification • CCNE1 mutation
|
PD-L1 IHC 22C3 pharmDx • TruSight Oncology 500 Assay
2years
Clinical • P1 data • Late-breaking abstract • BRCA Biomarker • PARP Biomarker
|
BRCA1 (Breast cancer 1, early onset) • BRCA2 (Breast cancer 2, early onset) • ARID1A (AT-rich interaction domain 1A) • CCNE1 (Cyclin E1) • PALB2 (Partner and localizer of BRCA2) • MUC16 (Mucin 16, Cell Surface Associated) • RAD51 (RAD51 Homolog A)
|
BRCA2 mutation • BRCA1 mutation • CCNE1 amplification • CCNE1 mutation
|
Lynparza (olaparib) • adavosertib (AZD1775)
2years
HOMOLOGOUS RECOMBINATION DEFICIENCY AND CYCLIN E1 AMPLIFICATION ARE CORRELATED WITH IMMUNE CELL INFILTRATION AND SURVIVAL IN HIGH-GRADE SEROUS OVARIAN CANCER (IGCS 2022)
Molecular profiles and TME are associated with OS. TME differs per profile, with higher immune cell densities showing a favorable OS, even within the profiles. HGSOC does not reflect one entity but comprises different entities based on molecular profile and TME which could assist with patienttailored treatment in the future.
BRCA Biomarker
|
BRCA1 (Breast cancer 1, early onset) • BRCA2 (Breast cancer 2, early onset) • HRD (Homologous Recombination Deficiency) • CD20 (Membrane Spanning 4-Domains A1) • CD8 (cluster of differentiation 8) • CCNE1 (Cyclin E1) • BRCA (Breast cancer early onset) • ITGAE (Integrin Subunit Alpha E)
|
BRCA2 mutation • BRCA1 mutation • HRD • CCNE1 amplification • HRD + BRCA1 mutation • CCNE1 mutation