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GENE:

CCDC88C (Coiled-Coil Domain Containing 88C)

i
Other names: CCDC88C, Coiled-Coil Domain Containing 88C, Dvl-Associating Protein With A High Frequency Of Leucine Residues, DAPLE, Spinocerebellar Ataxia 40, Hook-Related Protein 2, Protein Daple, SCA40, HkRP2, Coiled-Coil Domain-Containing Protein 88C, HDaple, HKRP2, HYC1
27d
Targeted Therapy for a Rare PDGFRB-Rearranged Myeloproliferative Neoplasm: A Case Report. (PubMed, Int J Mol Sci)
This allowed for targeted therapy with a tyrosine kinase inhibitor (TKI), leading to molecular remission monitored by RT-qPCR. This case highlights how a multidisciplinary approach can identify atypical transcripts in MPN, guiding targeted therapy with TK inhibitors, thus resulting in effective treatment and molecular remission.
Journal
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ABL1 (ABL proto-oncogene 1) • JAK2 (Janus kinase 2) • PDGFRB (Platelet Derived Growth Factor Receptor Beta) • CALR (Calreticulin) • CCDC88C (Coiled-Coil Domain Containing 88C)
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LDH elevation
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imatinib
3ms
Daple-FLT3 (CCDC88C-FLT3) gene fusion requires the coiled-coil domain for maximal activation and pericentrosomal localization. (PubMed, bioRxiv)
This leads to activation in STAT5a, AKT, and MAPK signaling, which can be modulated by the tyrosine kinase inhibitor (TKIs) sorafenib, and to a lesser degree, imatinib. These findings provide evidence that targeting Daple-FLT3 outside of its kinase domain may be a complementary approach with TKI therapy. Daple-FLT3 fusion proteins contain a constitutively active kinase domain, activating distinct signaling molecules in cellsCoiled-coil domain on Daple is dispensable for kinase activation, but necessary for maximal activation.
Journal
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FLT3 (Fms-related tyrosine kinase 3) • CCDC88C (Coiled-Coil Domain Containing 88C) • STAT5A (Signal Transducer And Activator Of Transcription 5A)
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sorafenib • imatinib
3ms
Long read nanopore DNA sequencing with adaptive sampling to identify tyrosine kinase fusion genes. (PubMed, Leukemia)
We sequenced genomic DNA from patients (n = 20) with a known or suspected TK gene fusion and identified rearrangements in 18 cases, including all cases with a known TK fusion, typical and atypical BCR::ABL1 rearrangements, an 843Kb deletion causing a FIP1L1::PDGFRA fusion, novel AGAP2::PDGFRB and NFIA::PDGFRB fusions, and a complex CCDC88C::PDGFRB rearrangement with multiple translocation events. The approach was fast (<72 h/sample from DNA to result), flexible with minimal hands-on laboratory time, and provided accurate, patient-specific characterisation of genomic breakpoints.
Journal
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ABL1 (ABL proto-oncogene 1) • FGFR1 (Fibroblast growth factor receptor 1) • PDGFRA (Platelet Derived Growth Factor Receptor Alpha) • PDGFRB (Platelet Derived Growth Factor Receptor Beta) • FIP1L1 (Factor Interacting With PAPOLA And CPSF1) • CCDC88C (Coiled-Coil Domain Containing 88C)
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FIP1L1-PDGFRA fusion
5ms
FPR3 sustains the immunosuppression of tumor-associated macrophages and accelerates the progression of gastric adenocarcinoma. (PubMed, Oncogene)
Mechanistically, FPR3 upregulates FZD7 and CCDC88C, leading to activation of the intracellular Wnt/PCP pathway and downstream JNK signaling, thereby promoting TAM development. Collectively, our study identifies FPR3 as a novel marker of immunosuppressive TAMs, elucidates its mechanistic role in macrophage plasticity, and offers new insights into potential therapeutic strategies for targeting the tumor microenvironment in GA.
Journal • IO biomarker
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CCDC88C (Coiled-Coil Domain Containing 88C) • FZD7 (Frizzled Class Receptor 7)
9ms
Spatial Transcriptomics Shows a Distinctive Tumour Microenvironment in the Invasive Versus Premalignant Portion of Early Cutaneous Squamous Cell Carcinoma. (PubMed, Exp Dermatol)
Functional enrichment analysis revealed that several pathways were altered in tumour and immune cells. In conclusion, distinctive changes in gene expression patterns were observed as AK progressed to SCC.
Retrospective data • Journal
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CCDC88C (Coiled-Coil Domain Containing 88C) • TSLP (Thymic Stromal Lymphopoietin) • PPP1CA (Protein Phosphatase 1 Catalytic Subunit Alpha) • PPP2R5C (Protein Phosphatase 2 Regulatory Subunit B'Gamma) • SVEP1 (Sushi, Von Willebrand Factor Type A, EGF And Pentraxin Domain Containing 1)
over1year
CCDC88C, an O-GalNAc glycosylation substrate of GALNT6, drives breast cancer metastasis by promoting c-JUN-mediated CEMIP transcription. (PubMed, Cancer Cell Int)
CCDC88C also could mediate the pro-metastatic potential of GALNT6 in breast cancer. Collectively, our findings uncover that CCDC88C may increase the risk of breast cancer metastasis and elucidate the underlying molecular mechanisms.
Journal
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CCDC88C (Coiled-Coil Domain Containing 88C) • JUN (Jun proto-oncogene) • CEMIP (Cell Migration Inducing Hyaluronidase 1)
almost2years
Prediction models of persistent taxane-induced peripheral neuropathy among breast cancer survivors using whole-exome sequencing. (PubMed, NPJ Precis Oncol)
For cramps in feet, difficulty climbing stairs and difficulty opening a jar the validation was unsuccessful. Polygenic prediction models including clinical risk factors can estimate the risk of persistent taxane-induced numbness in feet and tingling in feet in ESBCS.
Journal
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CCDC88C (Coiled-Coil Domain Containing 88C) • EPHA5 (EPH Receptor A5) • NR1H3 (Nuclear Receptor Subfamily 1 Group H Member 3) • ADAMTS2 (ADAM Metallopeptidase With Thrombospondin Type 1 Motif 2)
almost2years
Genetic architecture of the structural connectome. (PubMed, Nat Commun)
Heritability is enriched in regions with increased chromatin accessibility in adult oligodendrocytes (as well as microglia, inhibitory neurons and astrocytes) and multiple fetal cell types, suggesting that genetic control of structural connectivity is partially mediated by effects on myelination and early brain development. Our results indicate pervasive, pleiotropic, and spatially structured genetic control of white-matter structural connectivity via diverse neurodevelopmental pathways, and support the relevance of this genetic control to healthy brain function.
Journal
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STRN (Striatin) • EPHA3 (EPH receptor A3) • CCDC88C (Coiled-Coil Domain Containing 88C) • MAPT (Microtubule Associated Protein Tau) • MYO16 (Myosin XVI) • NUAK1 (NUAK Family Kinase 1) • SHTN1 (Shootin 1) • DPYSL2 (Dihydropyrimidinase Like 2) • CELF4 (CUGBP Elav-Like Family Member 4) • SEMA3A (Semaphorin 3A)