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BIOMARKER:

BTK C481Y

i
Other names: BTK, Bruton Tyrosine Kinase, Bruton Agammaglobulinemia Tyrosine Kinase, Tyrosine-Protein Kinase BTK, Bruton'S Tyrosine Kinase, B-Cell Progenitor Kinase, AGMX1, ATK, BPK, Tyrosine-Protein Kinase BTK Isoform (Lacking Exon 13 To 17), Dominant-Negative Kinase-Deficient Brutons Tyrosine Kinase, Tyrosine-Protein Kinase BTK Isoform (Lacking Exon 14), Truncated Bruton Agammaglobulinemia Tyrosine Kinase, Agammaglobulinaemia Tyrosine Kinase, Agammaglobulinemia Tyrosine Kinase, PSCTK1, IGHD3, IMD1, XLA, AT
Entrez ID:
Related biomarkers:
1year
A Single Center Real World Study of Outcome and Resistance of Bruton Tyrosine Kinase Inhibitors (BTKi) in Chinese Patients with Chronic Lymphocytic Leukeima/Small Lymphocytic Lymphoma (ASH 2023)
Ibrutinib, Zanubrutinib, Orelabrutinib were administered in 55.3%,18.3% and 17.9% of patients respectively, in addition to 6 patients with Acalabrutinib and one with Loxo-305, among them 47.7% (125/262) received BTKi as first line treatment...Venetoclax-based regimen might be an effective salvage therapy which could showed a benefit trend in PFS as compared to other post BTKi therapy (10.1 months vs 3.1 months, p= 0.1818)...Acquired BTK/PLCG2 mutations remained to be key drivers of BTKis resistance and BTKC481S mutation was the dominant mutation, while BTKT474 mutation was only detected in Orelabrutinib-resistant patients. The prognosis was rather poor for relapsed patients especially for RTs, treatment strategy after disease progression remains to be optimized.
Clinical • Real-world evidence • Real-world
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TP53 (Tumor protein P53) • IGH (Immunoglobulin Heavy Locus) • PLCG2 (Phospholipase C Gamma 2)
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TP53 mutation • LDH elevation • Chr del(11q) • BTK C481S • PLCG2 mutation • BTK C481 • BTK C481R • BTK C481Y
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Venclexta (venetoclax) • Imbruvica (ibrutinib) • Brukinsa (zanubrutinib) • Calquence (acalabrutinib) • Yinuokai (orelabrutinib) • Jaypirca (pirtobrutinib)
1year
Clinical Characteristics, Treatment Strategies, and Outcomes for CLL Patients with BTK Mutation; A Single Center Study (ASH 2023)
Twenty-three (76.7%) of the patients were on ibrutinib, while 7 (23.3%) were on acalabrutinib...Six patients (20.0%) continued on the same BTKi with addition of venetoclax, 10 (33.3%) patients were switched to venetoclax and immunotherapy (either obinutuzumab or rituximab), and 3 (10.0%) patients were started on single agent venetoclax...Three (10.0%) patients were taken to chimeric T cell receptor (CAR-T) cell therapy of which one patient had no response and was started on salvage treatment with duvelisib... Our results reveal that durable responses can be achieved by switching to venetoclax based regimens in patients with BTKi. Though the early results of the use of noncovalent BTKi in this setting aree encouraging, the durability of response is limited as new BTK mutations are selected and future therapeutic alternatives are needed for these subset of patients.
Clinical • IO biomarker
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TP53 (Tumor protein P53) • NOTCH1 (Notch 1) • SF3B1 (Splicing Factor 3b Subunit 1) • ASXL1 (ASXL Transcriptional Regulator 1) • BTK (Bruton Tyrosine Kinase) • TET2 (Tet Methylcytosine Dioxygenase 2) • BIRC3 (Baculoviral IAP repeat containing 3) • PLCG2 (Phospholipase C Gamma 2)
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TP53 mutation • ATM mutation • SF3B1 mutation • BTK C481S • PLCG2 mutation • BTK mutation • BTK C481R • BTK C481Y
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Venclexta (venetoclax) • Imbruvica (ibrutinib) • Rituxan (rituximab) • Gazyva (obinutuzumab) • Calquence (acalabrutinib) • Copiktra (duvelisib)
over1year
Genomic Evolution and Resistance to Pirtobrutinib in Covalent BTK-Inhibitor Pre-treated Chronic Lymphocytic Leukemia Patients: Results from the Phase I/II BRUIN Study (IWCLL 2023)
main study Substudy patients treated with VenR (n = 194) patients treated with BR (n = 195) patients retreated with VenR (n = 25) Baseline characteristics mean age, years (SD) 63.9 (10.5) 64.4 (9.6) 65.8 (8.3) Number of prior cancer therapy, n (%) 1 111 (57.2) 117 (60.0) 0 (0.0) 2 58 (29.9) 43 (22.1) 20 (80.0) ≥3 25 (12.9) 35 (17.9) 5 (20.0) del(17p) and/or TP53 mutation (aCGh), n (%) mutated 53 (27.3) 55 (28.2) 14 (56.0) unmutated 104 (53.6) 98 (50.3) 9 (36.0) unknown 37 (19.1) 42 (21.5) 2 (8.0) Genomic complexity, n (%) n = 48 n = 46 n = 20 3–4 34 (70.8) 29 (63.0) 3 (15.0) ≥5 14 (29.2) 17 (37.0) 8 (40.0) iGhV, n (%) n = 180 n = 180 n = 23 mutated 53 (29.4) 51 (28.3) 2 (8.7) unmutated 123 (68.3) 123 (68.3) 21 (91.3) unknown 4 (2.2) 6 (3.3) 0 (0.0) efficacy results median follow-up, months 85.7 85.7 33.4 Best oRR, % 93.3 67.7 72.0 umRD at eoCT of main study, n (%) 121 (62.4) 26 (13.3) 16 (64.0) umRD at eoCT of substudy, n (%) N/a N/a 8 (32.0) umRD at eoT of main study, n (%) 83 (70.3)* N/a 14 (56.0) umRD at eoT of substudy, n (%) N/a N/a 0 (0.0) median pFS, months (95% Ci) 54.7 17.0 23.3 (52.3, 59.9) (15.5, 21.7) (15.6, 24.3) 3-year oS rate, % (95% Ci) 88.4 78.9 53.1 (83.8, 93.0) (72.8, 84.9) (25.1, 81.0) *patients who completed 2 years of Ven without pD (n = 118) aCGh: array comparative genomic hybridization; BR: bendamustine- rituximab; Ci: confidence interval; del(17p): deletion in chromosome 17p; eoCT: end of combination treatment; eoT: end of treatment; iGhV immu- noglobulin heavy chain gene; oRR: overall response rate; oS: overall sur- vival; pD: progressive disease; pFS: progression free survival; SD: standard deviation; TP53: tumor protein p53; umRD: undetectable minimal residual disease; Ven(R): venetoclax-(rituximab) cBTKi pre-treated CLL pts treated with pirtobrutinib monotherapy in the phase 1/2 BRUIN trial (NCT03740529) who subsequently developed disease progression (PD) were included in this analysis...Pts received one or more of the following cBTKi: ibrutinib (n = 44, 90%), acalabrutinib (n = 10, 20%), or zanubrutinib (n = 1, 2%)... Pts who progressed on pirtobrutinib showed clearance of BTK C481 clones and the emergence or outgrowth of non-C481 clones, particularly gatekeeper T474 and kinase-impaired L528W mutations, as well as other VUS. Many acquired BTK mutations were shown to pre-exist at baseline at low VAF, reflecting emergence on prior cBTKi. Importantly, these baseline kinase domain BTK mutations did not preclude pirtobrutinib efficacy.
Clinical • P1/2 data
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TP53 (Tumor protein P53) • NOTCH1 (Notch 1) • SF3B1 (Splicing Factor 3b Subunit 1) • PLCG2 (Phospholipase C Gamma 2)
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TP53 mutation • Chr del(17p) • ATM mutation • BTK C481S • BTK mutation • BTK C481 • BTK C481R • BTK C481Y • BTK T474I
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Venclexta (venetoclax) • Imbruvica (ibrutinib) • Rituxan (rituximab) • Brukinsa (zanubrutinib) • Calquence (acalabrutinib) • Jaypirca (pirtobrutinib) • bendamustine
over1year
Mutations Detected in Real World Clinical Sequencing during BTK Inhibitor Treatment in Chronic Lymphocytic Leukemia (CLL) (IWCLL 2023)
73 patients had only one BTKi (ibrutinib (IBR), 64; acalabrutinib (ACA), 9). 12 pts had multiple BTKis, 8 with two drugs with IBR first followed by ACA (Nf3, 37.5%), vecabrutinib (Nf1, 12.5%), and PIR (Nf4, 50.0%); and 4 with three or more drugs... Our retrospective report summarizes mutations detected during BTKi treatment and shows that BTK L528W can occur during both covalent and non-covalent BTK inhibitor therapy. Four of six patients who progressed on PIR had T474 mutations. In addition, our results may suggest that activating mutations in RAS/RAF/MAPK pathway are related to BTKi resistance.
Clinical • Real-world evidence • IO biomarker • Real-world
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KRAS (KRAS proto-oncogene GTPase) • BRAF (B-raf proto-oncogene) • TP53 (Tumor protein P53) • NRAS (Neuroblastoma RAS viral oncogene homolog) • MAP2K1 (Mitogen-activated protein kinase kinase 1) • NF1 (Neurofibromin 1) • SF3B1 (Splicing Factor 3b Subunit 1) • NOTCH2 (Notch 2) • PLCG2 (Phospholipase C Gamma 2) • XPO1 (Exportin 1)
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TP53 mutation • KRAS mutation • BRAF mutation • NRAS mutation • Chr del(11q) • RAS mutation • SF3B1 mutation • BTK C481S • NOTCH2 mutation • PLCG2 mutation • BTK mutation • BTK C481R • BTK C481Y • BTK R665W • BTK T474I • BTK L845F • PLCG2 L845F • XPO1 mutation
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Imbruvica (ibrutinib) • Calquence (acalabrutinib) • vecabrutinib (SNS-062)
over1year
Bruton's Tyrosine Kinase and Phospholipase C-Gamma 2 Mutational Profiles in Pooled Analysis of Patients With Chronic Lymphocytic Leukemia Treated With Ibrutinib (IWCLL 2023)
Novel, non-C481 BTK mutations have been described, including BTK L528W, which has been reported in patients treated with ibrutinib, zanubrutinib, and pirtobrutinib (Maddocks, JAMA Oncol. This is the largest dataset characterizing the incidence and patterns of BTK and PLCG2 mutations in patients with CLL treated with ibrutinib. BTK C481 mutations are the most frequently occurring mutations. PLCG2 mutations occur across the gene at a low incidence per locus (<5%).
Retrospective data
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TP53 (Tumor protein P53) • IGH (Immunoglobulin Heavy Locus) • PLCG2 (Phospholipase C Gamma 2)
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TP53 mutation • BTK C481S • PLCG2 mutation • BTK mutation • BTK C481 • BTK C481R • BTK C481Y • BTK R665W • BTK T474I • BTK L845F • PLCG2 D1140N • PLCG2 L845F
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Imbruvica (ibrutinib) • Brukinsa (zanubrutinib) • Jaypirca (pirtobrutinib)
over1year
GENOMIC EVOLUTION AND RESISTANCE TO PIRTOBRUTINIB IN COVALENT BTK-INHIBITOR (CBTKI) PRE-TREATED CHRONIC LYMPHOCYTIC LEUKEMIA (CLL) PATIENTS: RESULTS FROM THE PHASE I/II BRUIN STUDY (EHA 2023)
Pts received one or more of the following cBTKi: ibrutinib (n=44, 90%), acalabrutinib (n=10, 20%), or zanubrutinib (n=1, 2%). Pts who progressed on pirtobrutinib showed clearance of BTK C481 clones and the emergence or outgrowth of non-C481 clones, particularly gatekeeper T474 and kinase-impaired L528W mutations, as well as other VUS. Many acquired BTK mutations were shown to pre-exist at baseline at low VAF, reflecting emergence on prior cBTKi. Importantly, these baseline kinase domain BTK mutations did not preclude pirtobrutinib efficacy.
Clinical • P1/2 data
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TP53 (Tumor protein P53) • NOTCH1 (Notch 1) • SF3B1 (Splicing Factor 3b Subunit 1) • PLCG2 (Phospholipase C Gamma 2)
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TP53 mutation • ATM mutation • BTK C481S • BTK mutation • BTK C481 • BTK C481R • BTK C481Y • BTK T474I
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Imbruvica (ibrutinib) • Brukinsa (zanubrutinib) • Calquence (acalabrutinib) • Jaypirca (pirtobrutinib)
over1year
Molecular associations of response to the new generation BTK inhibitor zanubrutinib in marginal zone lymphoma. (PubMed, Blood Adv)
Detection of acquired BTK and PLCG2 mutations in ctDNA while on therapy is feasible and may herald clinical disease progression. This trial was registered at https://anzctr.org.au/ as ACTRN12619000024145.
Journal
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NOTCH1 (Notch 1) • MYD88 (MYD88 Innate Immune Signal Transduction Adaptor) • KMT2D (Lysine Methyltransferase 2D) • NOTCH2 (Notch 2) • FAT1 (FAT atypical cadherin 1) • PLCG2 (Phospholipase C Gamma 2) • TNFAIP3 (TNF Alpha Induced Protein 3)
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KMT2D mutation • PLCG2 mutation • TNFAIP3 mutation • BTK C481Y • BTK R665W
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Brukinsa (zanubrutinib)
over1year
Discovery and preclinical study of novel BTK degrader HZ-Q1070 (AACR 2023)
In summary, HZ-Q1070 is a potent and highly selective BTK degrader against both BTK-WT and multiple BTK inhibitors-resistant mutations. In vivo, HZ-Q1070 exhibits excellent pharmacokinetic properties, BTK degradation activity and robust tumor growth inhibition in TMD8 and Mino mouse xenograft tumor model. These findings support further clinical development of HZ-Q1070 for the treatment of B cell malignancies.
Preclinical
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IKZF1 (IKAROS Family Zinc Finger 1)
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BTK C481S • BTK C481Y
2years
Mutation Spectrum, Characteristics and Impact of Mutation Profiling on Prognosis, Outcome and Treatment Responses in Patients (pts) with Mantle Cell Lymphoma (ASH 2022)
"Twenty-three pts were treated with standard of care brexucabtagene autoleucel (CART)... The clinical NGS-based assay for MCL pts at our institution has proven to have prognostic significance. Resistant MCL pts exhibit a preponderance of mutations involving TP53, epigenetic modifier and chromatin regulator genes. Comprehensive risk stratification of pts early on and during therapy is very useful and improves patient care, helps design next generation clinical trials and improves our understanding of the biology of resistant MCL in the BTKi and CART era."
Clinical
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TP53 (Tumor protein P53) • ATM (ATM serine/threonine kinase) • CDKN2A (Cyclin Dependent Kinase Inhibitor 2A) • DNMT3A (DNA methyltransferase 1) • RB1 (RB Transcriptional Corepressor 1) • NOTCH1 (Notch 1) • MYD88 (MYD88 Innate Immune Signal Transduction Adaptor) • SF3B1 (Splicing Factor 3b Subunit 1) • CCND1 (Cyclin D1) • BTK (Bruton Tyrosine Kinase) • TET2 (Tet Methylcytosine Dioxygenase 2) • KMT2D (Lysine Methyltransferase 2D) • SMARCA4 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily A, member 4) • CD79B (CD79b Molecule) • NOTCH2 (Notch 2) • BIRC3 (Baculoviral IAP repeat containing 3) • PAX5 (Paired Box 5) • CARD11 (Caspase Recruitment Domain Family Member 11) • NFKB1 (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1) • IGLL5 (Immunoglobulin Lambda Like Polypeptide 5) • MAP3K14 (Mitogen-Activated Protein Kinase Kinase Kinase 14) • NSD2 (Nuclear Receptor Binding SET Domain Protein 2) • S1PR1 (Sphingosine-1-Phosphate Receptor 1) • UBR5 (Ubiquitin Protein Ligase E3 Component N-Recognin 5)
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TP53 mutation • ATM mutation • SMARCA4 mutation • BTK mutation • BTK C481R • BTK C481Y • BTK T474I
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OncoSeek®
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Tecartus (brexucabtagene autoleucel)
2years
BTK kinase activity is dispensable for the survival of diffuse large B-cell lymphoma. (PubMed, J Biol Chem)
By performing parallel genome-wide CRISPR-Cas9 screening in DLBCL cells with wild-type or kinase-inactive BTK, we discovered that DLBCL cells with kinase-inactive BTK displayed increased dependence on Toll-like receptor 9 (TLR9) for their growth and/or survival. Our study demonstrates that the kinase activity of BTK is not essential for oncogenic BCR signaling and suggests that BTK's non-catalytic function is sufficient to sustain the survival of diffuse large B-cell lymphoma.
Journal • IO biomarker
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BTK (Bruton Tyrosine Kinase) • TLR9 (Toll Like Receptor 9)
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BTK mutation • BTK C481R • BTK C481Y
over2years
Kinase-deficient BTK mutants confer ibrutinib resistance through activation of the kinase HCK. (PubMed, Sci Signal)
Activated HCK subsequently phosphorylated PLCγ2, which propagated BCR signaling and promoted clonogenic cell proliferation. This kinase-independent mechanism could inform therapeutic approaches to CLL bearing either the C481F or C481Y BTK mutants.
Journal
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BTK (Bruton Tyrosine Kinase) • PLCG2 (Phospholipase C Gamma 2) • HCK (HCK Proto-Oncogene)
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BTK mutation • BTK C481Y
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Imbruvica (ibrutinib)
over2years
BTK GENE MUTATIONS IN RUSSIAN PATIENTS TREATED WITH IBRUTINIB: AS-PCR VERSUS NGS FOR ALLELIC LOAD ASSESSMENT (EHA 2022)
Conclusion AS-PCR protocol effective for the analysis of the BTK gene muta tions leading to an amino acid substitution at position C481 has been developed and validated. Prospective studies of low burden BTK mutations in the pathogenesis of relapse in CLL patients treated with BTK inhibitors have been started using this approach.
Clinical • Next-generation sequencing • Tumor Mutational Burden
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TMB (Tumor Mutational Burden) • BTK (Bruton Tyrosine Kinase)
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BTK C481S • BTK mutation • BTK C481 • BTK C481Y
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Imbruvica (ibrutinib)