Our findings suggest that stemness-related heterogeneity in LMS shapes the tumor immune microenvironment and contributes to disease progression. The six identified prognostic markers not only provide insights into the molecular mechanisms of LMS but also represent potential therapeutic targets for personalized treatment.
BOP1 and BUB1B were found to be correlated with unfavorable overall survival in patients with HCC. HCLS1 and SCAMP3 are associated with immunity, whereas BOP1 and BUB1B are modified by methylation and may serve as prognostic markers for HCC.
The expression levels of the top DEmRNA and module hub genes in CRC were validated using the Gene Expression Profiling Interactive Analysis (GEPIA) database. Generally, our findings offer crucial insight into the hub genes and novel lncRNAs in the development of CRC by bioinformatics analysis, information that may prove useful in the identification of new biomarkers and treatment targets in CRC; however, more experimental investigation is required to validate the findings of the present study.
The genes related to disulfidptosis are closely associated with tumor classification and immunity in patients with HCC. This is the first gene signature related to disulfidptosis demonstrated a strong predictive performance for the prognosis of HCC, which provide new perspectives for the diagnosis and treatment of HCC.
over 1 year ago
Journal • Gene Signature
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PRDX1 (Peroxiredoxin 1) • SLC7A11 (Solute Carrier Family 7 Member 11) • BOP1 (BOP1 Ribosomal Biogenesis Factor) • FLNC (Filamin C) • LRPPRC (Leucine Rich Pentatricopeptide Repeat Containing)
Potential drugs for PCOS and EC include quercetin, calcitriol and testosterone; for PCOS and OC, eugenol and 1-chloro-2,4-dinitrobenzene are identified. These findings offer insights into potential therapeutic targets and pathways linking PCOS with EC and OC, enhancing our understanding of the molecular mechanisms involved in these associations.
over 1 year ago
Journal
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PRDX1 (Peroxiredoxin 1) • GSTP1 (Glutathione S-transferase pi 1) • PLK1 (Polo Like Kinase 1) • HMOX1 (Heme Oxygenase 1) • RAD54L (DNA Repair And Recombination Protein RAD54) • NQO1 (NAD(P)H dehydrogenase, quinone 1) • BOP1 (BOP1 Ribosomal Biogenesis Factor) • PKMYT1 (Protein Kinase Membrane Associated Tyrosine/Threonine 1) • RECQL4( RecQ Like Helicase 4) • CDT1 (Chromatin Licensing And DNA Replication Factor 1)
Furthermore, single-cell data analysis revealed heterogeneous expression of hub UbRGs across different cell subtypes, while cytological experiments provided additional confirmation of the high expression of hub UbRGs in HCC. Our study provides valuable insights into the identification of novel ubiquitination-related biomarkers with potential applications for prognosis, immunotherapy prediction, and drug sensitivity in HCC.
We identify alterations, including changes in expression, deletions, amplifications and fusions in MYBL1, VCPIP1, BOP1 and MYC genes in many of the same patients, suggesting the panel of genes is involved in coordinated activity in patients. We propose that MYBL1, VCPIP1, MYC and BOP1 collectively be considered as genes associated with the chromosome 8q loci that potentially play a role in TNBC pathogenesis.
Moreover, we predicted 23 compounds, including methotrexate and CX-5461, associated with the expression signature of RiboSis genes. The current study generates a comprehensive blueprint of molecular alterations in RiboSis genes across cancers, which provides a valuable resource for RiboSis-based anti-tumor therapy.
2 years ago
Journal
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TP53 (Tumor protein P53) • BOP1 (BOP1 Ribosomal Biogenesis Factor)
• RF39, Clostridia_UCG_014, and Streptococcaceae were implicated in CHOL and TG modulation. • The composition of gut microbiota is influenced by host genetics.
Our data indicate that SNHG6 accelerates proliferation and glycolysis and inhibits the apoptosis of HCC cell lines by binding the BOP1 protein and enhancing its stability. Both SNHG6 and BOP1 are promising prognostic and therapeutic markers in HCC.
3 years ago
Journal
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TP53 (Tumor protein P53) • BOP1 (BOP1 Ribosomal Biogenesis Factor)