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GENE:

BOP1 (BOP1 Ribosomal Biogenesis Factor)

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Other names: BOP1 Ribosomal Biogenesis Factor, Ribosome Biogenesis Protein BOP1, Block Of Proliferation 1, Block Of Proliferation 1 Protein, BOP1
5ms
Integrated single-cell and bulk RNA-seq analysis reveals prognostic stemness genes in leiomyosarcoma. (PubMed, Front Oncol)
Our findings suggest that stemness-related heterogeneity in LMS shapes the tumor immune microenvironment and contributes to disease progression. The six identified prognostic markers not only provide insights into the molecular mechanisms of LMS but also represent potential therapeutic targets for personalized treatment.
Journal
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CD4 (CD4 Molecule) • BOP1 (BOP1 Ribosomal Biogenesis Factor) • CTBP1 (C-Terminal Binding Protein 1) • SRPK1 (SRSF Protein Kinase 1)
10ms
DNA methylation-driven genes in hepatocellular carcinoma patients: insights into immune infiltration and prognostic implications. (PubMed, Front Med (Lausanne))
BOP1 and BUB1B were found to be correlated with unfavorable overall survival in patients with HCC. HCLS1 and SCAMP3 are associated with immunity, whereas BOP1 and BUB1B are modified by methylation and may serve as prognostic markers for HCC.
Journal
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NOTCH3 (Notch Receptor 3) • BOP1 (BOP1 Ribosomal Biogenesis Factor) • BUB1B (BUB1 Mitotic Checkpoint Serine/Threonine Kinase B)
1year
Identification of Novel lncRNAs Related to Colorectal Cancer Through Bioinformatics Analysis. (PubMed, Biomed Res Int)
The expression levels of the top DEmRNA and module hub genes in CRC were validated using the Gene Expression Profiling Interactive Analysis (GEPIA) database. Generally, our findings offer crucial insight into the hub genes and novel lncRNAs in the development of CRC by bioinformatics analysis, information that may prove useful in the identification of new biomarkers and treatment targets in CRC; however, more experimental investigation is required to validate the findings of the present study.
Journal
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BOP1 (BOP1 Ribosomal Biogenesis Factor) • CDC20 (Cell Division Cycle 20) • CDK1 (Cyclin-dependent kinase 1) • BUB1 (BUB1 Mitotic Checkpoint Serine/Threonine Kinase) • BUB1B (BUB1 Mitotic Checkpoint Serine/Threonine Kinase B)
over1year
Identification of a prognostic disulfidptosis-related gene signature in hepatocellular cancer. (PubMed, J Gastrointest Oncol)
The genes related to disulfidptosis are closely associated with tumor classification and immunity in patients with HCC. This is the first gene signature related to disulfidptosis demonstrated a strong predictive performance for the prognosis of HCC, which provide new perspectives for the diagnosis and treatment of HCC.
Journal • Gene Signature
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PRDX1 (Peroxiredoxin 1) • SLC7A11 (Solute Carrier Family 7 Member 11) • BOP1 (BOP1 Ribosomal Biogenesis Factor) • FLNC (Filamin C) • LRPPRC (Leucine Rich Pentatricopeptide Repeat Containing)
over1year
Identification of Key Genes Associated with Polycystic Ovarian Syndrome and Endometrial and Ovarian Cancer through Bioinformatics. (PubMed, J Hum Reprod Sci)
Potential drugs for PCOS and EC include quercetin, calcitriol and testosterone; for PCOS and OC, eugenol and 1-chloro-2,4-dinitrobenzene are identified. These findings offer insights into potential therapeutic targets and pathways linking PCOS with EC and OC, enhancing our understanding of the molecular mechanisms involved in these associations.
Journal
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PRDX1 (Peroxiredoxin 1) • GSTP1 (Glutathione S-transferase pi 1) • PLK1 (Polo Like Kinase 1) • HMOX1 (Heme Oxygenase 1) • RAD54L (DNA Repair And Recombination Protein RAD54) • NQO1 (NAD(P)H dehydrogenase, quinone 1) • BOP1 (BOP1 Ribosomal Biogenesis Factor) • PKMYT1 (Protein Kinase Membrane Associated Tyrosine/Threonine 1) • RECQL4( RecQ Like Helicase 4) • CDT1 (Chromatin Licensing And DNA Replication Factor 1)
almost2years
Prognostic and Immune Landscape Analysis of Ubiquitination-related Genes in Hepatocellular Carcinoma: Based on Bulk and Single-cell RNA Sequencing Data. (PubMed, J Cancer)
Furthermore, single-cell data analysis revealed heterogeneous expression of hub UbRGs across different cell subtypes, while cytological experiments provided additional confirmation of the high expression of hub UbRGs in HCC. Our study provides valuable insights into the identification of novel ubiquitination-related biomarkers with potential applications for prognosis, immunotherapy prediction, and drug sensitivity in HCC.
Journal • Tumor mutational burden • PD(L)-1 Biomarker • IO biomarker
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TMB (Tumor Mutational Burden) • PD-1 (Programmed cell death 1) • BOP1 (BOP1 Ribosomal Biogenesis Factor) • CDC20 (Cell Division Cycle 20)
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PD-1 expression • CTLA4 expression
almost2years
Characterization of MYBL1 Gene in Triple-Negative Breast Cancers and the Genes' Relationship to Alterations Identified at the Chromosome 8q Loci. (PubMed, Int J Mol Sci)
We identify alterations, including changes in expression, deletions, amplifications and fusions in MYBL1, VCPIP1, BOP1 and MYC genes in many of the same patients, suggesting the panel of genes is involved in coordinated activity in patients. We propose that MYBL1, VCPIP1, MYC and BOP1 collectively be considered as genes associated with the chromosome 8q loci that potentially play a role in TNBC pathogenesis.
Journal
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MYC (V-myc avian myelocytomatosis viral oncogene homolog) • BOP1 (BOP1 Ribosomal Biogenesis Factor) • MYBL1 (MYB Proto-Oncogene Like 1)
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MYC expression
2years
Genomic hallmarks and therapeutic targets of ribosome biogenesis in cancer. (PubMed, Brief Bioinform)
Moreover, we predicted 23 compounds, including methotrexate and CX-5461, associated with the expression signature of RiboSis genes. The current study generates a comprehensive blueprint of molecular alterations in RiboSis genes across cancers, which provides a valuable resource for RiboSis-based anti-tumor therapy.
Journal
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TP53 (Tumor protein P53) • BOP1 (BOP1 Ribosomal Biogenesis Factor)
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TP53 mutation
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methotrexate • pidnarulex (CX-5461)
over2years
Host genetics and gut microbiota jointly regulate blood biochemical indicators in chickens. (PubMed, Appl Microbiol Biotechnol)
• RF39, Clostridia_UCG_014, and Streptococcaceae were implicated in CHOL and TG modulation. • The composition of gut microbiota is influenced by host genetics.
Journal
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BOP1 (BOP1 Ribosomal Biogenesis Factor)
over2years
BOP1 Promotes Prostate Cancer through the DUSP6/MAPK Pathway. (PubMed, Arch Esp Urol)
This finding demonstrated that BOP1 promoted CaP progression by regulating the DUSP6/MAPK pathway.
Journal
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BOP1 (BOP1 Ribosomal Biogenesis Factor) • DUSP6 (Dual specificity phosphatase 6)
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DUSP6 expression
3years
LncRNA SNHG6 promotes glycolysis reprogramming in hepatocellular carcinoma by stabilizing the BOP1 protein. (PubMed, Anim Cells Syst (Seoul))
Our data indicate that SNHG6 accelerates proliferation and glycolysis and inhibits the apoptosis of HCC cell lines by binding the BOP1 protein and enhancing its stability. Both SNHG6 and BOP1 are promising prognostic and therapeutic markers in HCC.
Journal
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TP53 (Tumor protein P53) • BOP1 (BOP1 Ribosomal Biogenesis Factor)
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TP53 mutation • BOP1 overexpression