In conclusion, by bioinformatics analysis, new diagnostic and prognostic biomarkers for patients with BRCA have been identified and the key gene, ARHGEF6, is a suppressor gene in BRCA progression. These findings provide new directions for BRCA clinical application.
5 months ago
Journal • BRCA Biomarker
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EZH2 (Enhancer of zeste 2 polycomb repressive complex 2 subunit) • BRCA (Breast cancer early onset) • PIK3R1 (Phosphoinositide-3-Kinase Regulatory Subunit 1) • ALDH1A1 (Aldehyde Dehydrogenase 1 Family Member A1) • CDC42 (Cell Division Cycle 42) • ARHGEF6 (Rac/Cdc42 Guanine Nucleotide Exchange Factor 6) • ITGA1 (Integrin Subunit Alpha 1)
In conclusion, the results of this study suggest that ARHGEF6 is a protective gene in LUAD patients. A combination of ARHGEF6 and TMB could be used as a potential biomarker in the screening of immunotherapy regimens, which are provided to patients with LUAD.
ARHGEF6 functions as a tumor suppressor in LUAD and may serve as a new prognostic marker and potential therapeutic target. Regulating tumor microenvironment and immunity, inhibiting the expression of UGTs and ECM components in the cancer cells, and decreasing the stemness of the tumors may among the mechanisms underlying the function of ARHGEF6 in LUAD.
High expression of ARHGEF6 downregulates the negative regulation of myeloid differentiation process and upregulates G protein-coupled receptor signaling pathway-related processes, among which HOXA9, HOXB6, and TRH have significant differential expression and prognostic impact in AML. Therefore, ARHGEF6 can become a prognostic marker in AML; ARHGEF6low patients can gain from auto/allo-HSCT.
Finally, LUAD samples were classified two clusters based on DEGs for subgroups analysis. In summary, this study comprehensively uncovered that ARHGEF6 could be identified as a potential prognostic and immunological biomarker in lung adenocarcinoma.