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GENE:

APEX1 (Apurinic/Apyrimidinic Endodeoxyribonuclease 1)

i
Other names: APEX1, Apurinic/Apyrimidinic Endodeoxyribonuclease 1, REF1, HAP1, APEN, APE, APX, REF-1, APE-1, APEX, APEX Nuclease (Multifunctional DNA Repair Enzyme) 1, DNA-(Apurinic Or Apyrimidinic Site) Endonuclease, Apurinic-Apyrimidinic Endonuclease 1, Redox Factor-1, APE1, APEX Nuclease (Multifunctional DNA Repair Enzyme), Deoxyribonuclease (Apurinic Or Apyrimidinic), Apurinic/Apyrimidinic (Abasic) Endonuclease, DNA-(Apurinic Or Apyrimidinic Site) Lyase, AP Endonuclease Class I, AP Endonuclease 1, Protein REF-1, APEX Nuclease, AP Lyase
Associations
16d
The cooperative regulation of miR-221 by APE1 and AUF1 impacts p27Kip1 defining a miR signature relevant for cervical cancer. (PubMed, FEBS Open Bio)
Moreover, we identified a 13-miR signature, comprising miRs regulated by both APE1 and AUF1, that exhibits strong prognostic value in cervical cancer. These findings suggest a novel potential role of both APE1 and AUF1 as therapeutic targets in cervical cancer.
Journal
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HNRNPD (Heterogeneous Nuclear Ribonucleoprotein D) • MIR221 (MicroRNA 221) • APEX1 (Apurinic/Apyrimidinic Endodeoxyribonuclease 1)
23d
Genetic variations in base excision repair genes and the risk of developing hepatoblastoma: A five-center case-control study from East China. (PubMed, Cancer Genet)
This study provides exploratory evidence suggesting that genetic variation in BER pathway genes may contribute to HB susceptibility in Chinese children. Given the multiple testing burden and modest effect sizes, these findings should be considered hypothesis-generating and require validation in independent cohorts and functional studies.
Journal • PARP Biomarker
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PARP1 (Poly(ADP-Ribose) Polymerase 1) • XRCC1 (X-Ray Repair Cross Complementing 1) • APEX1 (Apurinic/Apyrimidinic Endodeoxyribonuclease 1) • LIG3 (DNA Ligase 3)
2ms
Identification of unique biomarkers in colorectal cancer based on comprehensive analysis and machine learning. (PubMed, Front Oncol)
The seven hub RBP genes are potential biomarkers for CRC, providing new insights and therapeutic targets. However, functional validation and larger sample sizes are needed for clinical application.
Journal • BRCA Biomarker
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BRCA1 (Breast cancer 1, early onset) • DNMT1 (DNA methyltransferase 1) • PTTG1 (PTTG1 Regulator Of Sister Chromatid Separation, Securin) • UHRF1 (Ubiquitin Like With PHD And Ring Finger Domains 1) • APEX1 (Apurinic/Apyrimidinic Endodeoxyribonuclease 1)
2ms
USP36 inhibits ferroptosis of melanoma cells by stabilizing APEX1. (PubMed, Clin Exp Med)
Using A375 and SK-MEL-28 melanoma cells treated with the ferroptosis inducer erastin, we analyzed USP36 expression and evaluated its functional role through both overexpression and knockdown experiments...Collectively, these findings establish USP36 as an oncogene in melanoma that inhibits ferroptosis through stabilization of APEX1. Therefore, targeting the USP36-APEX1 axis may represent a novel therapeutic approach for melanoma treatment.
Journal
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APEX1 (Apurinic/Apyrimidinic Endodeoxyribonuclease 1)
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erastin
3ms
Mitochondrial DNA Damage and Histological Features in Liver Tissue of Azoxymethane-Treated Apex1 Haploinsufficient Mice. (PubMed, Biomolecules)
Histological analysis indicated increased nuclear inclusions and ductular proliferation in both strains, whereas fibrosis was attenuated in Apex1+/- mice. Collectively, these findings show that APE1 is essential for preserving mtDNA integrity and regulating bioenergetics and histopathological responses to alkylation-induced liver injury, highlighting its dual role in mitochondrial maintenance and modulating inflammatory outcomes.
Preclinical • Journal
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GAPDH (Glyceraldehyde-3-Phosphate Dehydrogenase) • APEX1 (Apurinic/Apyrimidinic Endodeoxyribonuclease 1)
4ms
Genetic Variants in BER Pathway Genes Confer Wilms Tumor Susceptibility: New Insights from an Eight-Center Case-Control Study in Chinese Children. (PubMed, Ann Surg Oncol)
FEN1 rs174538 A>G, FEN1 rs4246215 T>G, APEX1 rs3136817 T>C, and XRCC1 rs25487 C>T are associated with Wilms tumor susceptibility, which provides potential molecular markers for the early diagnosis of Wilms tumor.
Journal
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XRCC1 (X-Ray Repair Cross Complementing 1) • APEX1 (Apurinic/Apyrimidinic Endodeoxyribonuclease 1) • FEN1 (Flap Structure-Specific Endonuclease 1)
4ms
Molecular Mechanisms of Preventable Causes of Oral Cancer and Precancer Through Polymorphism in DNA Base Excision Repair Genes in Patients with Tobacco Products Habits. (PubMed, J Maxillofac Oral Surg)
Blood samples were collected, and gene polymorphisms were identified using PCR-RFLP technique. Our study results revealed a statistically significant association between gene polymorphisms OGG1-Ser326Cys (p = 0.008), XRCC1-Arg194Trp (p = 0.009), XRCC1-Arg399Gln (p < 0.001), APEX1-Asp148Glu (p < 0.001) and the occurrence of leukoplakia, OSMF and OSCC.
Journal
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PARP1 (Poly(ADP-Ribose) Polymerase 1) • MUTYH (MutY homolog) • OGG1 (8-Oxoguanine DNA glycosylase) • XRCC1 (X-Ray Repair Cross Complementing 1) • APEX1 (Apurinic/Apyrimidinic Endodeoxyribonuclease 1) • LIG3 (DNA Ligase 3)
6ms
The role of α-hydroxybutyrate in modulating sepsis progression: identification of key targets and biomarkers through multi-database data mining, machine learning, and unsupervised clustering. (PubMed, Front Pharmacol)
This study identifies key α-HB-related targets and biomarkers for sepsis, offering new insights into its pathophysiology. The findings highlight the potential of α-HB in modulating immune responses and suggest that α-HB-related targets could serve as promising therapeutic targets for sepsis management.
Journal
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PIK3CB (Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) • CTSD (Cathepsin D) • APEX1 (Apurinic/Apyrimidinic Endodeoxyribonuclease 1) • SLC40A1 (Solute Carrier Family 40 Member 1)
6ms
Air pollution-related immune gene prognostic signature for hepatocellular carcinoma: network toxicology, machine learning and multi-omics analysis. (PubMed, Front Immunol)
We identified key APIGs and constructed a robust APIG-based prognostic signature for HCC. CDC25C was a key target through which APs impact HCC and multiple other cancers.
Journal
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MELK (Maternal Embryonic Leucine Zipper Kinase) • CDC25C (Cell Division Cycle 25C) • APEX1 (Apurinic/Apyrimidinic Endodeoxyribonuclease 1) • ATG4B (Autophagy Related 4B Cysteine Peptidase) • CDC25B (Cell Division Cycle 25B) • GNRP (Ras-Specific Guanine Nucleotide-Releasing Factor 1) • SLC2A1 (Solute Carrier Family 2 Member 1)
7ms
Regulation of Cell Cycle-Related Damage/Repair Mechanism and Oxidative Stress Status by Oroxylin A in Hepatocellular Carcinoma Cells. (PubMed, Int J Mol Sci)
Flow cytometry analysis revealed that Orox A treatment caused G2/M phase arrest in the cell cycle. These findings collectively suggest that Orox A exerts cytotoxic effects on Hep3B cells through mechanisms involving DNA damage, oxidative stress, and cell cycle modulation, making it a promising candidate for further anticancer therapy development.
Journal
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ATR (Ataxia telangiectasia and Rad3-related protein) • APEX1 (Apurinic/Apyrimidinic Endodeoxyribonuclease 1)
8ms
The Prognostic Value of the XPC rs2228001 Single Nucleotide Polymorphism in Cholangiocarcinoma. (PubMed, Liver Int)
These findings suggest that SNPs in DNA repair genes, particularly XPC rs2228001, play a crucial role in modulating the prognosis of CCA.
Journal • PARP Biomarker
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PARP1 (Poly(ADP-Ribose) Polymerase 1) • ERCC5 (ERCC Excision Repair 5 Endonuclease 2) • XPC (XPC Complex Subunit, DNA Damage Recognition And Repair Factor) • APEX1 (Apurinic/Apyrimidinic Endodeoxyribonuclease 1)
8ms
Teniposide Triggers DNA Repair Inhibition by Binding and Ubiquitination of Apurinic/Apyrimidinic Endonuclease 1 to Boost Oxidative DNA Damage for Lung Cancer Destruction. (PubMed, ACS Pharmacol Transl Sci)
In summary, these data make a strong argument for the notion that Ten/VM-26-mediated inhibition of APEX1 contributes to DNA damage and thereby achieves favorable antilung cancer effects, wherein Ten/VM-26 could down-regulate APEX1 by binding and ubiquitination. The current study presents a critical target and mechanism for Ten/VM-26-mediated antilung cancer therapy.
Journal
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APEX1 (Apurinic/Apyrimidinic Endodeoxyribonuclease 1)
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Vumon (teniposide)